RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 HCRTR1O43613 425 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 POLR2IP36954 125 aaKnown RBP15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 RAD52P43351 418 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 ERV3-1Q14264 604 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 H1FXQ92522 213 aaKnown RBP15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 TOE1Q96GM8 510 aaKnown RBP15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 C20orf27Q9GZN8 174 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 FZD9O00144 591 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 MANEAQ5SRI9 462 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 SCD5Q86SK9 330 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 OR2M7Q8NG81 312 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 CHAC2Q8WUX2 184 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 FIZ1Q96SL8 496 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 RTL8AQ9BWD3 113 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 CHST2Q9Y4C5 530 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 DIDO1Q9BTC0 2240 aaKnown RBP15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 SH2D1BO14796 132 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 SCRG1O75711 98 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 CYC1P08574 325 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 CTSAP10619 480 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 SPANXN5Q5MJ07 72 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 BCDIN3DQ7Z5W3 292 aaKnown RBP15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 PLA2G12AQ9BZM1 189 aa15.45■□□□□ 0.06
SMCHD1-201ENST00000320876 CLEC2LP0C7M8 214 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 SLC35E2P0CK97 266 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 DCAF16Q9NXF7 216 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 CGGBP1Q9UFW8 167 aaPredicted RBP15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 PRAMEF25A6NGN4 478 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 THEM4Q5T1C6 240 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 PRAMEF5Q5TYX0 476 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 C1orf140Q5VVS0 124 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 PRAMEF6Q5VXH4 476 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 PIGTQ969N2 578 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 A0A0U1RQS6 177 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 GFRA2O00451 464 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 TCN2P20062 427 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 MPGP29372 298 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 RBP2P50120 134 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 EDDM3AQ14507 147 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 OR10P1Q8NGE3 313 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 MS4A8Q9BY19 250 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 NDRG4Q9ULP0 352 aaKnown RBP15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 PPP1R3CQ9UQK1 317 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 ERHP84090 104 aaKnown RBP15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 DGCR2P98153 550 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 FAM71CQ8NEG0 241 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 AKR1E2Q96JD6 320 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 OPALINQ96PE5 141 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 MMP26Q9NRE1 261 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 ARRDC5A6NEK1 342 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 SLC25A6P12236 298 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 RPL7P18124 248 aaKnown RBP15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 TAZQ16635 292 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 LYG2Q86SG7 212 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 BCO1Q9HAY6 547 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 RNF24Q9Y225 148 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 LOC107986453A0A1B0GWG9 222 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 NCBP2LA6PVI3 153 aaKnown RBP15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 CNMDO75829 334 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 C1SP09871 688 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 BMPR1AP36894 532 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 HIST1H3AP68431 136 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 GABRG1Q8N1C3 465 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 OR51F2Q8NH61 342 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 BANF2Q9H503 90 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 TEX50A0A1B0GTY4 177 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 CD37P11049 281 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 ATF6BQ99941 703 aa15.44■□□□□ 0.06
SMCHD1-201ENST00000320876 ZNF468Q5VIY5 522 aaPredicted RBP15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 CALHM2Q9HA72 323 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 LRIT1Q9P2V4 623 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 CCDC187A0A096LP49 1063 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 OR4E1P0C645 316 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 APEHP13798 732 aaKnown RBP15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 CLLU1OSQ5K130 101 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 ADAMTSL4Q6UY14 1074 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 LYRM4Q9HD34 91 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 ARPC3O15145 178 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 TPOP07202 933 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 APOBEC1P41238 236 aaKnown RBP15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 ISL1P61371 349 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 MMACHCQ9Y4U1 282 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 LOC102723971A0A1B0GUV8 181 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 ZNF320A2RRD8 509 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 CCKARP32238 428 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 RPL27P61353 136 aaKnown RBP15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 OR8G1Q15617 311 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 SLC48A1Q6P1K1 146 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 LCN15Q6UWW0 184 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 SLCO4C1Q6ZQN7 724 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 C12orf76Q8N812 135 aaPredicted RBP15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 MBOAT4Q96T53 435 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 TPSD1Q9BZJ3 242 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 IGKV6D-21A0A0A0MT36 114 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 AQP7P3A6NL99 342 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 GJB3O75712 270 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 ZNF528Q3MIS6 628 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 LYSMD4Q5XG99 296 aa15.43■□□□□ 0.06
SMCHD1-201ENST00000320876 FBXW5Q969U6 566 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms