RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.46□□□□□ -0.9
COL3A1-202ENST00000317840 SLC36A1Q7Z2H8 476 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 IQCF2Q8IXL9 164 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 GVQW1Q8N7I0 195 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 CPNE2Q96FN4 548 aaPredicted RBP9.46□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF578Q96N58 590 aaPredicted RBP9.46□□□□□ -0.9
COL3A1-202ENST00000317840 GPX7Q96SL4 187 aaPredicted RBP9.46□□□□□ -0.9
COL3A1-202ENST00000317840 EMC6Q9BV81 110 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 SMOC1Q9H4F8 434 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 OR52A1Q9UKL2 312 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 AUP1Q9Y679 476 aa9.46□□□□□ -0.9
COL3A1-202ENST00000317840 KIF26AQ9ULI4 1882 aaPredicted RBP9.46□□□□□ -0.9
COL3A1-202ENST00000317840 KCNAB3O43448 404 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 IL33O95760 270 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 MPIG6BO95866 241 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 ABHD16AO95870 558 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 HEXBP07686 556 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 HOXC4P09017 264 aaPredicted RBP9.45□□□□□ -0.9
COL3A1-202ENST00000317840 HSD11B1P28845 292 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 OR3A2P47893 321 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 FMODQ06828 376 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 ATPAF1Q5TC12 328 aaPredicted RBP9.45□□□□□ -0.9
COL3A1-202ENST00000317840 C1orf140Q5VVS0 124 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 TMPRSS9Q7Z410 1059 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 SPAG16Q8N0X2 631 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF705EA8MWA4 302 aaPredicted RBP9.45□□□□□ -0.9
COL3A1-202ENST00000317840 F8W036 122 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF208O43345 1280 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 HCKP08631 526 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 CSF2RBP32927 897 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 ATP1B3P54709 279 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 S100A10P60903 97 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 BLOC1S1P78537 153 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 TLE3Q04726 772 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 BAMBIQ13145 260 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF273Q14593 569 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF704Q6ZNC4 412 aaPredicted RBP9.45□□□□□ -0.9
COL3A1-202ENST00000317840 FJX1Q86VR8 437 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 OR6K3Q8NGY3 331 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 OR1S1Q8NH92 325 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 RNF128Q8TEB7 428 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 MED29Q9NX70 200 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 A0A0B4J2A0 478 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 H3BUI4 141 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 AQP8O94778 261 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 SLC2A1P11166 492 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 RPA2P15927 270 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 GUCA1AP43080 201 aaPredicted RBP9.45□□□□□ -0.9
COL3A1-202ENST00000317840 SNTB1Q13884 538 aaKnown RBP9.45□□□□□ -0.9
COL3A1-202ENST00000317840 MEF2DQ14814 521 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 CARD17Q5XLA6 110 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 GPX8Q8TED1 209 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 ASB5Q8WWX0 329 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 FOXRED1Q96CU9 486 aaPredicted RBP9.45□□□□□ -0.9
COL3A1-202ENST00000317840 SLC25A32Q9H2D1 315 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 MBD2Q9UBB5 411 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 SHPKQ9UHJ6 478 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 MRPS18BQ9Y676 258 aaKnown RBP9.45□□□□□ -0.9
COL3A1-202ENST00000317840 SPTA1P02549 2419 aa9.45□□□□□ -0.9
COL3A1-202ENST00000317840 PMP2P02689 132 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 PI3P19957 117 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 CCR5P51681 352 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 SLC9A3R2Q15599 337 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 MOGAT2Q3SYC2 334 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 C14orf28Q4W4Y0 310 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF684Q5T5D7 378 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 TMEM244Q5VVB8 128 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 ATRAIDQ6UW56 229 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 HSD17B13Q7Z5P4 300 aaPredicted RBP9.44□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF615Q8N8J6 731 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 OR52N5Q8NH56 324 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 ASB12Q8WXK4 309 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 MR1Q95460 341 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 CCNL2Q96S94 520 aaPredicted RBP9.44□□□□□ -0.9
COL3A1-202ENST00000317840 TRBV5-7A0A0A0MS05 114 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 OR2T1O43869 369 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 ERCC1P07992 297 aaPredicted RBP9.44□□□□□ -0.9
COL3A1-202ENST00000317840 HRH1P35367 487 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 PPP1R1AQ13522 171 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 PRTGQ2VWP7 1150 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 C11orf87Q6NUJ2 197 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 NPRL2Q8WTW4 380 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 MCHR2Q969V1 340 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 FAM71F1Q96KD3 344 aaPredicted RBP9.44□□□□□ -0.9
COL3A1-202ENST00000317840 S100A13Q99584 98 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 LAT2Q9GZY6 243 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 SLCO5A1Q9H2Y9 848 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 LDAHQ9H6V9 325 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 GAREM1Q9H706 876 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 TMEM184BQ9Y519 407 aaPredicted RBP9.44□□□□□ -0.9
COL3A1-202ENST00000317840 PI4KAP42356 2102 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 A8MVM7 634 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 AGPAT2O15120 278 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 HTR3BO95264 441 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 FARS2O95363 451 aaKnown RBP9.44□□□□□ -0.9
COL3A1-202ENST00000317840 PGAM2P15259 253 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 GNB3P16520 340 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 PVALBP20472 110 aaPredicted RBP9.44□□□□□ -0.9
COL3A1-202ENST00000317840 CNR1P21554 472 aa9.44□□□□□ -0.9
COL3A1-202ENST00000317840 EMP2P54851 167 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms