RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 ELFN2Q5R3F8 820 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 LIPKQ5VXJ0 399 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 DMKNQ6E0U4 476 aaPredicted RBP12.32□□□□□ -0.44
MSRA-201ENST00000317173 GDPGP1Q6ZNW5 385 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 SKA3Q8IX90 412 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 GABRG1Q8N1C3 465 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 OR10S1Q8NGN2 331 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 DOK1Q99704 481 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 COQ7Q99807 217 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 ATF6BQ99941 703 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 SH3GL3Q99963 347 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 CENPMQ9NSP4 180 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 ATPIF1Q9UII2 106 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 ST6GALNAC2Q9UJ37 374 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 SH3BGRL2Q9UJC5 107 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 E9PI62 339 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 MSTNO14793 375 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 RER1O15258 196 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 UBL3O95164 117 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 CLDN1O95832 211 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 APOC1P02654 83 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 IGHV1-2P23083 117 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 MMP16P51512 607 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 CCR9P51686 369 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 FOXG1P55316 489 aaPredicted RBP12.32□□□□□ -0.44
MSRA-201ENST00000317173 PMPCAQ10713 525 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 ALKBH1Q13686 389 aaKnown RBP12.32□□□□□ -0.44
MSRA-201ENST00000317173 ZNF829Q3KNS6 432 aaPredicted RBP12.32□□□□□ -0.44
MSRA-201ENST00000317173 C1QTNF12Q5T7M4 302 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 OR7E24Q6IFN5 339 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 C3P1Q6ZMU1 363 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 C17orf78Q8N4C9 275 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 ZNF808Q8N4W9 903 aaPredicted RBP12.32□□□□□ -0.44
MSRA-201ENST00000317173 MS4A15Q8N5U1 240 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 HTRA1Q92743 480 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 BCL2L2Q92843 193 aaPredicted RBP12.32□□□□□ -0.44
MSRA-201ENST00000317173 ISOC1Q96CN7 298 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 CCDC120Q96HB5 630 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 DMRTA2Q96SC8 542 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 MOB1AQ9H8S9 216 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 GALNT8Q9NY28 637 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 PLEK2Q9NYT0 353 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 STUB1Q9UNE7 303 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 SF3B6Q9Y3B4 125 aaKnown RBP12.32□□□□□ -0.44
MSRA-201ENST00000317173 R4GMQ9 66 aa12.32□□□□□ -0.44
MSRA-201ENST00000317173 ARPC4-TTLL3A0A0A6YYG9 625 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 TRBV2A0A0J9YWF9 115 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 SGCEO43556 437 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 RPP14O95059 124 aaKnown RBP12.31□□□□□ -0.44
MSRA-201ENST00000317173 WNT11O96014 354 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 HLA-DPB1P04440 258 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 MMP7P09237 267 aaPredicted RBP12.31□□□□□ -0.44
MSRA-201ENST00000317173 ZNF32P17041 273 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 HSD11B1P28845 292 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 ARR3P36575 388 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 GTF2A1P52655 376 aaPredicted RBP12.31□□□□□ -0.44
MSRA-201ENST00000317173 PSMA6P60900 246 aaKnown RBP12.31□□□□□ -0.44
MSRA-201ENST00000317173 TAF13Q15543 124 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 CCDC92Q53HC0 331 aaPredicted RBP12.31□□□□□ -0.44
MSRA-201ENST00000317173 C9orf135Q5VTT2 229 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 FOXB2Q5VYV0 432 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 CD200R1LQ6Q8B3 271 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 ARL9Q6T311 187 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 SLC16A12Q6ZSM3 486 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 ZNF433Q8N7K0 673 aaPredicted RBP12.31□□□□□ -0.44
MSRA-201ENST00000317173 ZNF610Q8N9Z0 462 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 OR2G2Q8NGZ5 317 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 RND1Q92730 232 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
MSRA-201ENST00000317173 PGLYRP3Q96LB9 341 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 KCNJ15Q99712 375 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 OR2H1Q9GZK4 316 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 MEMO1Q9Y316 297 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 GRIP1Q9Y3R0 1128 aa12.31□□□□□ -0.44
MSRA-201ENST00000317173 UTP20O75691 2785 aaKnown RBP12.3□□□□□ -0.44
MSRA-201ENST00000317173 A0A0G2JNJ9 132 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 CIB4A0PJX0 185 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 ACOD1A6NK06 481 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 TMEM212A6NML5 194 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 DVL2O14641 736 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 AIREO43918 545 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 DOK2O60496 412 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 SRSF10O75494 262 aaKnown RBP12.3□□□□□ -0.44
MSRA-201ENST00000317173 COX5BP10606 129 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 AGAP20933 346 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 PAX7P23759 505 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 GADD45AP24522 165 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 OTX1P32242 354 aaPredicted RBP12.3□□□□□ -0.44
MSRA-201ENST00000317173 PSMB10P40306 273 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 GDI2P50395 445 aaKnown RBP12.3□□□□□ -0.44
MSRA-201ENST00000317173 TBRG1Q3YBR2 411 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 TMEM53Q6P2H8 277 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 XKRXQ6PP77 449 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 SPATC1Q76KD6 591 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 MRGPRGQ86SM5 289 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 ALDH16A1Q8IZ83 802 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 ZFP41Q8N8Y5 198 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 ITLN2Q8WWU7 325 aaPredicted RBP12.3□□□□□ -0.44
MSRA-201ENST00000317173 SPTSSAQ969W0 71 aa12.3□□□□□ -0.44
MSRA-201ENST00000317173 C4orf45Q96LM5 186 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms