RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 NDUFB6O95139 128 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 TMIGD3P0DMS9 266 aaPredicted RBP12.63□□□□□ -0.39
VRK3-201ENST00000316763 PTHLHP12272 177 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 HLA-DOBP13765 273 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 IFNGR1P15260 489 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 FSTP19883 344 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 PTGS2P35354 604 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 PTGDSP41222 190 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 DNASE1L1P49184 302 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 ZNF41P51814 821 aaPredicted RBP12.63□□□□□ -0.39
VRK3-201ENST00000316763 SSBP1Q04837 148 aaKnown RBP12.63□□□□□ -0.39
VRK3-201ENST00000316763 MFGE8Q08431 387 aaPredicted RBP12.63□□□□□ -0.39
VRK3-201ENST00000316763 PCGF3Q3KNV8 242 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 C2orf76Q3KRA6 126 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 OTPQ5XKR4 325 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 TMEM225Q6GV28 225 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 THOC7Q6I9Y2 204 aaKnown RBP12.63□□□□□ -0.39
VRK3-201ENST00000316763 TMEM81Q6P7N7 255 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 DEGS2Q6QHC5 323 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 OPN5Q6U736 354 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 ZNF704Q6ZNC4 412 aaPredicted RBP12.63□□□□□ -0.39
VRK3-201ENST00000316763 MEIOBQ8N635 442 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 SLC26A10Q8NG04 563 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 SNIP1Q8TAD8 396 aaKnown RBP12.63□□□□□ -0.39
VRK3-201ENST00000316763 ASB5Q8WWX0 329 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 CDCP1Q9H5V8 836 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 PPP4R1LQ9P1A2 415 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 HHLA2Q9UM44 414 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 CHCHD2Q9Y6H1 151 aaPredicted RBP12.63□□□□□ -0.39
VRK3-201ENST00000316763 CEP295Q9C0D2 2601 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 NCOR2Q9Y618 2525 aa12.63□□□□□ -0.39
VRK3-201ENST00000316763 IGLV3-32A0A0A0MS00 114 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 SNRPGP15A8MWD9 76 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 ICMTO60725 284 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 SERPINA7P05543 415 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 TPOP07202 933 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 ITGA5P08648 1049 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 ACHEP22303 614 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 HSF1Q00613 529 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 RIPPLY1Q0D2K3 151 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 CAMK2DQ13557 499 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 LINC00303Q3SY05 128 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 KDM8Q8N371 416 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 SPICQ8N5J4 248 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 KCNE4Q8WWG9 221 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 RELTQ969Z4 430 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 ARL5BQ96KC2 179 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 SERINC1Q9NRX5 453 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 ALKBH4Q9NXW9 302 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 SLC23A1Q9UHI7 598 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 VDAC3Q9Y277 283 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 B3GALT5Q9Y2C3 310 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 TRAV18A0A075B6X5 111 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 TP53I11O14683 189 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 CREBL2O60519 120 aaPredicted RBP12.62□□□□□ -0.39
VRK3-201ENST00000316763 SNAPC5O75971 98 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 MPZL1O95297 269 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 ALDOBP05062 364 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 CPN1P15169 458 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 IL11P20809 199 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 PRSS3P35030 304 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 RAD52P43351 418 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 SSR4P51571 173 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 MECP2P51608 486 aaKnown RBP12.62□□□□□ -0.39
VRK3-201ENST00000316763 PER3P56645 1201 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 POU3F1Q03052 451 aaPredicted RBP12.62□□□□□ -0.39
VRK3-201ENST00000316763 FOXF1Q12946 379 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 PLA2G7Q13093 441 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 SNTA1Q13424 505 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 RBMS2Q15434 407 aaKnown RBP12.62□□□□□ -0.39
VRK3-201ENST00000316763 PCK2Q16822 640 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 ZBTB37Q5TC79 503 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 TMEM244Q5VVB8 128 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 NLRC3Q7RTR2 1065 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.62□□□□□ -0.39
VRK3-201ENST00000316763 OR10H5Q8NGA6 315 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 OR11H4Q8NGC9 324 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 OR13C3Q8NGS6 347 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 NTNG2Q96CW9 530 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 SLC25A44Q96H78 314 aaPredicted RBP12.62□□□□□ -0.39
VRK3-201ENST00000316763 MS4A3Q96HJ5 214 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 MRGPRX4Q96LA9 322 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 IP6K3Q96PC2 410 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 ATG5Q9H1Y0 275 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 METTL17Q9H7H0 456 aaPredicted RBP12.62□□□□□ -0.39
VRK3-201ENST00000316763 SH2D2AQ9NP31 389 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 NPDC1Q9NQX5 325 aaPredicted RBP12.62□□□□□ -0.39
VRK3-201ENST00000316763 OR52A1Q9UKL2 312 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 EMC9Q9Y3B6 208 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 CELSR3Q9NYQ7 3312 aa12.62□□□□□ -0.39
VRK3-201ENST00000316763 KLK10O43240 276 aa12.61□□□□□ -0.39
VRK3-201ENST00000316763 APC2O95996 2303 aa12.61□□□□□ -0.39
VRK3-201ENST00000316763 HRGP04196 525 aa12.61□□□□□ -0.39
VRK3-201ENST00000316763 ISG15P05161 165 aa12.61□□□□□ -0.39
VRK3-201ENST00000316763 H2BFMP0C1H6 154 aa12.61□□□□□ -0.39
VRK3-201ENST00000316763 AKAIN1P0CW23 69 aa12.61□□□□□ -0.39
VRK3-201ENST00000316763 IGFBP3P17936 291 aaPredicted RBP12.61□□□□□ -0.39
VRK3-201ENST00000316763 WT1P19544 449 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms