RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 Q9H521 79 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 PNRC2Q9NPJ4 139 aaKnown RBP15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 RAB26Q9ULW5 256 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 ABCA4P78363 2273 aa15.48■□□□□ 0.07
SSSCA1-201ENST00000309328 LOC100509620A0A075B734 347 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 ZNF670-ZNF695F2Z2N8 137 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 ZNF254O75437 659 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 OTX1P32242 354 aaPredicted RBP15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 UCP2P55851 309 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 SELENOVP59797 346 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 ISL1P61371 349 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 CSNK2BP67870 215 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 EGR3Q06889 387 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 SPOCK1Q08629 439 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 RAB40BQ12829 278 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 SNTB2Q13425 540 aaKnown RBP15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 KRTAP27-1Q3LI81 207 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 AGAP6Q5VW22 663 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 TMEM154Q6P9G4 183 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 DRAM2Q6UX65 266 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 BCDIN3DQ7Z5W3 292 aaKnown RBP15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 EGFL6Q8IUX8 553 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 SLC35F2Q8IXU6 374 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 FBXL14Q8N1E6 418 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 OR51G2Q8NGK0 314 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 THEM6Q8WUY1 208 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 UBE2FQ969M7 185 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 KCNJ15Q99712 375 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 MROQ9BYG7 248 aa15.47■□□□□ 0.07
SSSCA1-201ENST00000309328 M0R135 149 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 FADS2O95864 444 aaKnown RBP15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 HSD11B1P28845 292 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 DCTDP32321 178 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 OPRL1P41146 370 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 EVX1P49640 407 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 FABP6P51161 128 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 ROM1Q03395 351 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 HGFACQ04756 655 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 DBPQ10586 325 aaPredicted RBP15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 MOGQ16653 247 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 KLHL22Q53GT1 634 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 OTPQ5XKR4 325 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 SMAP2Q8WU79 429 aaPredicted RBP15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 APOBEC3DQ96AK3 386 aaPredicted RBP15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 RNFT2Q96EX2 444 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 ZNF799Q96GE5 643 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 ZNF184Q99676 751 aaPredicted RBP15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 ANKRD60Q9BZ19 345 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 UBTD1Q9HAC8 227 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 INPP5EQ9NRR6 644 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 CENPMQ9NSP4 180 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 MRPS18AQ9NVS2 196 aaKnown RBP15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 CMAHPQ9Y471 501 aa15.46■□□□□ 0.07
SSSCA1-201ENST00000309328 E7EQL1 145 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 SMPD2O60906 423 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 PLAUP00749 431 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 MRPL3P09001 348 aaKnown RBP15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 H2BFMP0C1H6 154 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 DBTP11182 482 aaKnown RBP15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 PRF1P14222 555 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 TTKP33981 857 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 RPS27P42677 84 aaKnown RBP15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 ZNF91Q05481 1191 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 EFNB3Q15768 340 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 KRT80Q6KB66 452 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 RGS7BPQ6MZT1 257 aaPredicted RBP15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 PAMR1Q6UXH9 720 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 B3GLCTQ6Y288 498 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 ZNF679Q8IYX0 411 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 MUC15Q8N387 334 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 LILRB1Q8NHL6 650 aaPredicted RBP15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 FBLIM1Q8WUP2 373 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 NINJ1Q92982 152 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 PIGTQ969N2 578 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 GPR160Q9UJ42 338 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 EXOGQ9Y2C4 368 aaKnown RBP15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 GRIP1Q9Y3R0 1128 aa15.45■□□□□ 0.06
SSSCA1-201ENST00000309328 A0A1W2PPR1 153 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 ACOD1A6NK06 481 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 B9A039 149 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 F5H5K5 113 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 WBP4O75554 376 aaKnown RBP15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 CLIC3O95833 236 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 GNAO1P09471 354 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 ACSM4P0C7M7 580 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 CCL2P13500 99 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 SERPINF1P36955 418 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 CXCR4P61073 352 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 MED21Q13503 144 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 C6orf52Q5T4I8 152 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 ZNF322Q6U7Q0 402 aaPredicted RBP15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 KRT77Q7Z794 578 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 DTX2Q86UW9 622 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 PAQR4Q8N4S7 273 aaPredicted RBP15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 ACBD7Q8N6N7 88 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 OR10S1Q8NGN2 331 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 ABHD4Q8TB40 342 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 TMEM171Q8WVE6 324 aa15.44■□□□□ 0.06
SSSCA1-201ENST00000309328 APH1BQ8WW43 257 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms