RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 HAVCR2Q8TDQ0 301 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 MOAP1Q96BY2 351 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 KCNJ16Q9NPI9 418 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 SLC35A3Q9Y2D2 325 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 WDR45Q9Y484 360 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 KPTNQ9Y664 436 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 A0A1B0GX78 115 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 ZNF736B4DX44 427 aaPredicted RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 PPP1R2P9O14990 202 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 ACTL6AO96019 429 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 GAAP10253 952 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 RIDAP52758 137 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 CXADRP78310 365 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 EIF2B1Q14232 305 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 ZNF584Q8IVC4 421 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 OR13C2Q8NGS9 318 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 OR1L3Q8NH93 324 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 CNRIP1Q96F85 164 aaPredicted RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 MRI1Q9BV20 369 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 SELENOIQ9C0D9 397 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 PARP12Q9H0J9 701 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 TMEM27Q9HBJ8 222 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 SIDT1Q9NXL6 827 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 FOXJ3Q9UPW0 622 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 SNRNP200O75643 2136 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 PMS2P1A4D2B8 440 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 HCRTR1O43613 425 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 FGF17O60258 216 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 CYTIPO60759 359 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 IFNA10P01566 189 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 PMP2P02689 132 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 RBP2P50120 134 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 PLA2G7Q13093 441 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 EXOSC7Q15024 291 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 CDK5R1Q15078 307 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 WDR74Q6RFH5 385 aaPredicted RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 MBOAT2Q6ZWT7 520 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 SLC35F2Q8IXU6 374 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 ZNF595Q8IYB9 648 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 CA13Q8N1Q1 262 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 OR1J2Q8NGS2 313 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 HAVCR1Q96D42 359 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 SMIM19Q96E16 107 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 NRIP2Q9BQI9 281 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 ULBP3Q9BZM4 244 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 METTL1Q9UBP6 276 aaKnown RBP9.85□□□□□ -0.83
LSM3-201ENST00000306024 CSAG2Q9Y5P2 127 aa9.85□□□□□ -0.83
LSM3-201ENST00000306024 A0A0G2JK05 382 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 FAM171A2A8MVW0 826 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 DCTN6O00399 190 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 TACSTD2P09758 323 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 ZNF44P15621 663 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 SLC6A6P31641 620 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 GABRA3P34903 492 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 GAS1P54826 345 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 TAS2R19P59542 299 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 FOXK2Q01167 660 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 IL34Q6ZMJ4 242 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 C16orf58Q96GQ5 468 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 ADAD1Q96M93 576 aaKnown RBP9.84□□□□□ -0.83
LSM3-201ENST00000306024 PRRX2Q99811 253 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 UNKLQ9H9P5 680 aaKnown RBP9.84□□□□□ -0.83
LSM3-201ENST00000306024 SPACA1Q9HBV2 294 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 PILRAQ9UKJ1 303 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 KCNIP3Q9Y2W7 256 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 PUS1Q9Y606 427 aaKnown RBP eCLIP9.84□□□□□ -0.83
LSM3-201ENST00000306024 CXorf65A6NEN9 183 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 ARG1P05089 322 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 SELLP14151 372 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 PCP4P48539 62 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 NKAIN1Q4KMZ8 207 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 VWA2Q5GFL6 755 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 DHRS13Q6UX07 377 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 OR51D1Q8NGF3 324 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 OR6N1Q8NGY5 312 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.84□□□□□ -0.83
LSM3-201ENST00000306024 HIST1H2BAQ96A08 127 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 ZNF649Q9BS31 505 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 ZNF223Q9UK11 482 aaPredicted RBP9.84□□□□□ -0.83
LSM3-201ENST00000306024 WASF3Q9UPY6 502 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 MOKQ9UQ07 419 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 ZNF281Q9Y2X9 895 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 WDR87Q6ZQQ6 2873 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 PCNX2A6NKB5 2137 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 MDC1Q14676 2089 aaKnown RBP9.84□□□□□ -0.83
LSM3-201ENST00000306024 C5orf52A6NGY3 159 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 ZNF705GA8MUZ8 300 aaPredicted RBP9.84□□□□□ -0.83
LSM3-201ENST00000306024 PRR33A8MZF0 331 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 UBE2CO00762 179 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 SLC31A2O15432 143 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 KCNAB3O43448 404 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 GPRIN2O60269 458 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 CTSBP07858 339 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 CHRM4P08173 479 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 RAB5AP20339 215 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 EMP2P54851 167 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 SHBQ15464 509 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 LPCAT3Q6P1A2 487 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 GDF7Q7Z4P5 450 aa9.84□□□□□ -0.83
LSM3-201ENST00000306024 DAZLQ92904 295 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms