RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 FARSAQ9Y285 508 aaKnown RBP11.53□□□□□ -0.56
HIF3A-204ENST00000300862 R4GMQ9 66 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 CPAMD8Q8IZJ3 1885 aa11.53□□□□□ -0.56
HIF3A-204ENST00000300862 RALGAPA1Q6GYQ0 2036 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 TMEM235A6NFC5 223 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 SRSF10O75494 262 aaKnown RBP11.52□□□□□ -0.56
HIF3A-204ENST00000300862 GIMD1P0DJR0 217 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 LIPCP11150 499 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 IGFBP3P17936 291 aaPredicted RBP11.52□□□□□ -0.56
HIF3A-204ENST00000300862 FOXK1P85037 733 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 TLE3Q04726 772 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 C11orf88Q6PI97 169 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 C17orf107Q6ZR85 190 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 OR2AK2Q8NG84 335 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 OR4S1Q8NGB4 309 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 OR4D6Q8NGJ1 314 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 STK35Q8TDR2 534 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 ST7LQ8TDW4 575 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 GPX8Q8TED1 209 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 ASB10Q8WXI3 467 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 CMBLQ96DG6 245 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 PHF7Q9BWX1 381 aaPredicted RBP11.52□□□□□ -0.56
HIF3A-204ENST00000300862 APMAPQ9HDC9 416 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 G6PC2Q9NQR9 355 aa11.52□□□□□ -0.56
HIF3A-204ENST00000300862 LOC100509620A0A075B734 347 aa11.52□□□□□ -0.57
HIF3A-204ENST00000300862 SIGLEC5O15389 551 aa11.52□□□□□ -0.57
HIF3A-204ENST00000300862 RAB3DO95716 219 aa11.52□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF28P17035 718 aa11.52□□□□□ -0.57
HIF3A-204ENST00000300862 SIGLEC14Q08ET2 396 aa11.52□□□□□ -0.57
HIF3A-204ENST00000300862 H1FNTQ75WM6 255 aaPredicted RBP11.52□□□□□ -0.57
HIF3A-204ENST00000300862 HSD17B13Q7Z5P4 300 aaPredicted RBP11.52□□□□□ -0.57
HIF3A-204ENST00000300862 FAM46BQ96A09 425 aa11.52□□□□□ -0.57
HIF3A-204ENST00000300862 ARL6Q9H0F7 186 aa11.52□□□□□ -0.57
HIF3A-204ENST00000300862 PHF3Q92576 2039 aaKnown RBP11.52□□□□□ -0.57
HIF3A-204ENST00000300862 DMDP11532 3685 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 OR6C76A6NM76 312 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 IGHMP01871 453 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 AMY2AP04746 511 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 PPP3CBP16298 524 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 HSF1Q00613 529 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 NKPD1Q17RQ9 610 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 SCGB2B2Q4G0G5 96 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-204ENST00000300862 TMEM234Q8WY98 164 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 PNPLA2Q96AD5 504 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 FGGYQ96C11 551 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 MRPS24Q96EL2 167 aaKnown RBP11.51□□□□□ -0.57
HIF3A-204ENST00000300862 TRBV11-1A0A0K0K1C0 115 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 PCP4L1A6NKN8 68 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 F5H5P2 479 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 EFNA2O43921 213 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 HEXBP07686 556 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 H2BFMP0C1H6 154 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 CFPP27918 469 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 GNALP38405 381 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 BIDP55957 195 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 PMPCAQ10713 525 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 GK2Q14410 553 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-204ENST00000300862 GSG1LQ6UXU4 331 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF574Q6ZN55 896 aaPredicted RBP11.51□□□□□ -0.57
HIF3A-204ENST00000300862 ANKRD37Q7Z713 158 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 RTN4RL2Q86UN3 420 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 NAXDQ8IW45 347 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 LINC00518Q8N0U6 118 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF454Q8N9F8 522 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 PLPP5Q8NEB5 264 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 FBXO4Q9UKT5 387 aa11.51□□□□□ -0.57
HIF3A-204ENST00000300862 SDK2Q58EX2 2172 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 CPED1A4D0V7 1026 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 HMSDA8MTL9 139 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 DNASE2O00115 360 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-204ENST00000300862 BCAT2O15382 392 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-204ENST00000300862 C17orf67Q0P5P2 114 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 NR0B2Q15466 257 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 SLC22A6Q4U2R8 563 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF660Q6AZW8 331 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-204ENST00000300862 TSSK4Q6SA08 328 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 CD163Q86VB7 1156 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 THRSPQ92748 146 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 KCNK17Q96T54 332 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 KLRF1Q9NZS2 232 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF230Q9UIE0 474 aaPredicted RBP11.5□□□□□ -0.57
HIF3A-204ENST00000300862 TRIOBPQ9H2D6 2365 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 ANKUB1A6NFN9 424 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 TMEM200CA6NKL6 621 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 WDPCPO95876 746 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 SORDQ00796 357 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 NKAIN1Q4KMZ8 207 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 RNF144BQ7Z419 303 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 ADGRE4PQ86SQ3 457 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 EIF4E3Q8N5X7 224 aaKnown RBP11.5□□□□□ -0.57
HIF3A-204ENST00000300862 C11orf40Q8WZ69 217 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 ST8SIA2Q92186 375 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 SPACA5Q96QH8 159 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 OR6C1Q96RD1 312 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 ZNF416Q9BWM5 594 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 PTGES2Q9H7Z7 377 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 CNTD2Q9H8S5 307 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 KLK13Q9UKR3 277 aa11.5□□□□□ -0.57
HIF3A-204ENST00000300862 CACNA1EQ15878 2313 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms