RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 TRAM1Q15629 374 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 TMEM91Q6ZNR0 172 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 CATSPERDQ86XM0 798 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 MS4A15Q8N5U1 240 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 DCLRE1CQ96SD1 692 aaKnown RBP21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 ATF6BQ99941 703 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 PDCD1LG2Q9BQ51 273 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 OR2H1Q9GZK4 316 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 G6PC2Q9NQR9 355 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 LOC100506127A0A0U1RQW1 187 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 SGCEO43556 437 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 GPRIN2O60269 458 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 OTX1P32242 354 aaPredicted RBP21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 KIR3DL2P43630 455 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 GRB2P62993 217 aaKnown RBP21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 MFGE8Q08431 387 aaPredicted RBP21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 RAB35Q15286 201 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 WDR38Q5JTN6 314 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 ZNF433Q8N7K0 673 aaPredicted RBP21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 ABHD4Q8TB40 342 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 COQ7Q99807 217 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 HDHD5Q9BXW7 423 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 WNT5BQ9H1J7 359 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 OPN3Q9H1Y3 402 aaPredicted RBP21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 RNF167Q9H6Y7 350 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 TXNL4BQ9NX01 149 aaKnown RBP21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 FAM206AQ9NX38 181 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 PLEK2Q9NYT0 353 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 SSR3Q9UNL2 185 aa21.53■■□□□ 1.04
GTF2A1-201ENST00000298173 TMEM269A0A1B0GVZ9 245 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 SLC22A1O15245 554 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 TGFBR1P36897 503 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 TGFBR3Q03167 851 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 NFATC3Q12968 1075 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 SPCS2Q15005 226 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 SLC36A2Q495M3 483 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 PPP1R14AQ96A00 147 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 DMRTA2Q96SC8 542 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 KCNJ15Q99712 375 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 HDHD2Q9H0R4 259 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 ZNF281Q9Y2X9 895 aa21.52■■□□□ 1.04
GTF2A1-201ENST00000298173 A0A0G2JNJ9 132 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF503-AS2A6NEH8 195 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 OR6C6A6NF89 314 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 E9PLN8 166 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 TAF13Q15543 124 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 GABRA6Q16445 453 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 ST3GAL2Q16842 350 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 KRTAP27-1Q3LI81 207 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF774Q6NX45 483 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 VKORC1Q9BQB6 163 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 B3GNT2Q9NY97 397 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 Q9UFV3 132 aa21.51■■□□□ 1.03
GTF2A1-201ENST00000298173 GABRPO00591 440 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 CRYGSP22914 178 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 PCSK6P29122 969 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 ECH1Q13011 328 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 INSL4Q14641 139 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF829Q3KNS6 432 aaPredicted RBP21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 TBRG1Q3YBR2 411 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 BEND4Q6ZU67 534 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 DPPA2Q7Z7J5 298 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 OR5AK2Q8NH90 309 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 OR1F12Q8NHA8 337 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 EXOSC4Q9NPD3 245 aaKnown RBP21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF629Q9UEG4 869 aaPredicted RBP21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 SLC22A13Q9Y226 551 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 TMEM212A6NML5 194 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 HLA-HP01893 362 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 HSD11B1P28845 292 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 OPRM1P35372 400 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 PSMA6P60900 246 aaKnown RBP21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 P2RY6Q15077 328 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 HIKESHIQ53FT3 197 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 ZNF474Q6S9Z5 364 aaPredicted RBP21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 PRSS45Q7RTY3 260 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 AKR7LQ8NHP1 331 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 RGP1Q92546 391 aaPredicted RBP21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 SH3BGRL2Q9UJC5 107 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 OR52A1Q9UKL2 312 aa21.5■■□□□ 1.03
GTF2A1-201ENST00000298173 A0A1W2PPW3 197 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 LOC110117498-PIK3R3F6TDL0 507 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 DOK2O60496 412 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 UGT2B10P36537 528 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 CA7P43166 264 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 PRKXP51817 358 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 YIF1BQ5BJH7 314 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 UNQ9370/PRO34162Q6UXP9 181 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 ALDH16A1Q8IZ83 802 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 C1orf162Q8NEQ5 155 aaPredicted RBP21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 OR13C5Q8NGS8 318 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 NOX3Q9HBY0 568 aa21.49■■□□□ 1.03
GTF2A1-201ENST00000298173 DVL2O14641 736 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 RGS9O75916 674 aaPredicted RBP21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 LYZL6O75951 148 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 HOXB1P14653 301 aaPredicted RBP21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 ARR3P36575 388 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 CACNA1BQ00975 2339 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 ACSM3Q53FZ2 586 aa21.48■■□□□ 1.03
GTF2A1-201ENST00000298173 PABPC1L2AQ5JQF8 200 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms