RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 ATXN1LP0C7T5 689 aaKnown RBP10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 CTNSO60931 367 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 IGHG1P01857 330 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 NKAIN1Q4KMZ8 207 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 LYRM7Q5U5X0 104 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 MARCH1Q8TCQ1 289 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 IL21Q9HBE4 155 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 RAB9BQ9NP90 201 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 POLR2AP24928 1970 aaKnown RBP10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 UGDHO60701 494 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 PRRX1P54821 245 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 DMRTA1Q5VZB9 504 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 PLPP6Q8IY26 295 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 VN1R17PQ8TDU5 208 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 TMEM255BQ8WV15 326 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 FAM163AQ96GL9 167 aaPredicted RBP10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 PPP1R3CQ9UQK1 317 aa10.79□□□□□ -0.68
SHROOM3-201ENST00000296043 CD3DP04234 171 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 SELENOPP49908 381 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 ZNF511Q8NB15 262 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 NEIL2Q969S2 332 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 ZDBF2Q9HCK1 2354 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 DOCK6Q96HP0 2047 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 MCRIP1C9JLW8 97 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 FOXO1Q12778 655 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 NSDHLQ15738 373 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 C9orf62Q8N4C0 152 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 OR5L2Q8NGL0 311 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 GPR61Q9BZJ8 451 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 OR51M1Q9H341 326 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 B4GALT7Q9UBV7 327 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 GDF6Q6KF10 455 aaPredicted RBP10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 GPX7Q96SL4 187 aaPredicted RBP10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 SGK494L7N484 410 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 F2RP25116 425 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 OR3A1P47881 315 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 LINC00303Q3SY05 128 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 CYS1Q717R9 158 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 MYPOPQ86VE0 399 aaPredicted RBP10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 PTRH1Q86Y79 214 aaKnown RBP10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 MKXQ8IYA7 352 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 ARL6IP6Q8N6S5 226 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 CDRT4Q8N9R6 151 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 C2orf15Q8WU43 125 aaKnown RBP10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 PREX1Q8TCU6 1659 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 OR5H15A6NDH6 313 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 OR5H1A6NKK0 313 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 CDRT15L2A8MXV6 281 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 CSF2RAP15509 400 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 BPIFA4PQ86YQ2 179 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 DEFB126Q9BYW3 111 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 PELI2Q9HAT8 420 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 CACNA1GO43497 2377 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 UBR1Q8IWV7 1749 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 COL5A2P05997 1499 aaPredicted RBP10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 OR5K3A6NET4 321 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 CD82P27701 267 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 POU3F1Q03052 451 aaPredicted RBP10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 DUSP28Q4G0W2 176 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 GDF7Q7Z4P5 450 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 TMEM151BQ8IW70 566 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 PFN4Q8NHR9 129 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 OIT3Q8WWZ8 545 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 OR2D2Q9H210 308 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 C8AP07357 584 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC25A35Q3KQZ1 300 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 GLDNQ6ZMI3 551 aaPredicted RBP10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 GPRIN1Q7Z2K8 1008 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 CHST8Q9H2A9 424 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 UQCC1Q9NVA1 299 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 SERTAD3Q9UJW9 196 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 SIGLEC5O15389 551 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 MSCO60682 206 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 PRAMEF4O60810 478 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 SIGLEC14Q08ET2 396 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 TMEM267Q0VDI3 215 aaPredicted RBP10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 C11orf87Q6NUJ2 197 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 TMPRSS11FQ6ZWK6 438 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 LINC00518Q8N0U6 118 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 CDCA4Q9BXL8 241 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 WDR76Q9H967 626 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 DLL4Q9NR61 685 aa10.78□□□□□ -0.68
SHROOM3-201ENST00000296043 NSUN5P2Q63ZY6 315 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 NUDT8Q8WV74 236 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 CLEC4DQ8WXI8 215 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 ADAT1Q9BUB4 502 aaKnown RBP10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 OBP2BQ9NPH6 170 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 WSB1Q9Y6I7 421 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 PTGFRP43088 359 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 ZNF85Q03923 595 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 MELKQ14680 651 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 FUBP3Q96I24 572 aaKnown RBP eCLIP10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 ATG101Q9BSB4 218 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 CEBPBP17676 345 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 FAM131CQ96AQ9 280 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 TNFRSF13CQ96RJ3 184 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 CLSTN3Q9BQT9 956 aa10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 NTPCRQ9BSD7 190 aaKnown RBP10.77□□□□□ -0.68
SHROOM3-201ENST00000296043 DIRC3C9JPN6 131 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms