RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 SKA3Q8IX90 412 aa15.57■□□□□ 0.08
CCDC78-201ENST00000293889 RFLNBQ8N5W9 214 aa15.57■□□□□ 0.08
CCDC78-201ENST00000293889 ACBD7Q8N6N7 88 aa15.57■□□□□ 0.08
CCDC78-201ENST00000293889 OR2T27Q8NH04 317 aa15.57■□□□□ 0.08
CCDC78-201ENST00000293889 OTOSQ8NHW6 89 aa15.57■□□□□ 0.08
CCDC78-201ENST00000293889 RNF167Q9H6Y7 350 aa15.57■□□□□ 0.08
CCDC78-201ENST00000293889 NDUFB11Q9NX14 153 aa15.57■□□□□ 0.08
CCDC78-201ENST00000293889 COQ3Q9NZJ6 369 aa15.57■□□□□ 0.08
CCDC78-201ENST00000293889 COPS3Q9UNS2 423 aa15.57■□□□□ 0.08
CCDC78-201ENST00000293889 POLR1DQ9Y2S0 133 aa15.57■□□□□ 0.08
CCDC78-201ENST00000293889 LRRK2Q5S007 2527 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 A0A1W2PQL4 384 aaPredicted RBP15.56■□□□□ 0.08
CCDC78-201ENST00000293889 RAD51DO75771 328 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 CST2P09228 141 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 ALOX5APP20292 161 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 CRYBB2P43320 205 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 ETV1P50549 477 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 ACTC1P68032 377 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 ACTA1P68133 377 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 SPHARQ15513 63 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 HIKESHIQ53FT3 197 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 MTFR2Q6P444 385 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 LHFPL3Q86UP9 236 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 SETD6Q8TBK2 473 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 FBXO17Q96EF6 278 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 JAM3Q9BX67 310 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 ASH2LQ9UBL3 628 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 STUB1Q9UNE7 303 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 COL12A1Q99715 3063 aa15.56■□□□□ 0.08
CCDC78-201ENST00000293889 DAPL1A0PJW8 107 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 CIB4A0PJX0 185 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 WIPF3A6NGB9 483 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 ZNF670-ZNF695F2Z2N8 137 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 TMCC2O75069 709 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 FARS2O95363 451 aaKnown RBP15.55■□□□□ 0.08
CCDC78-201ENST00000293889 HSMCR30P0CW71 290 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 EIF2B2P49770 351 aaKnown RBP15.55■□□□□ 0.08
CCDC78-201ENST00000293889 DEFA1P59665 94 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 DEFA3P59666 94 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 ZNF85Q03923 595 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 GABRA6Q16445 453 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 SFRP5Q5T4F7 317 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 SLC18B1Q6NT16 456 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 STAC2Q6ZMT1 411 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 SSX6Q7RTT6 188 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 SLC16A14Q7RTX9 510 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 POC5Q8NA72 575 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 FGFBP3Q8TAT2 258 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 THEM6Q8WUY1 208 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 ASB5Q8WWX0 329 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 AMELYQ99218 206 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 MNTQ99583 582 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 SDHCQ99643 169 aaPredicted RBP15.55■□□□□ 0.08
CCDC78-201ENST00000293889 ZNF649Q9BS31 505 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 ZNF224Q9NZL3 707 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 NPAP1Q9NZP6 1156 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 CLEC2DQ9UHP7 191 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 LAMP5Q9UJQ1 280 aa15.55■□□□□ 0.08
CCDC78-201ENST00000293889 PATE4P0C8F1 98 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 LIMS3P0CW19 117 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 LIMS4P0CW20 117 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 MYL12AP19105 171 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 PSMA1P25786 263 aaKnown RBP15.54■□□□□ 0.08
CCDC78-201ENST00000293889 EIF2B1Q14232 305 aaKnown RBP15.54■□□□□ 0.08
CCDC78-201ENST00000293889 SLC25A35Q3KQZ1 300 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 TBRG1Q3YBR2 411 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 SPANXN2Q5MJ10 180 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 BHLHA15Q7RTS1 189 aaPredicted RBP15.54■□□□□ 0.08
CCDC78-201ENST00000293889 DCXRQ7Z4W1 244 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 ZNF454Q8N9F8 522 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 C1orf162Q8NEQ5 155 aaPredicted RBP15.54■□□□□ 0.08
CCDC78-201ENST00000293889 LILRB4Q8NHJ6 448 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 MAP6Q96JE9 813 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 TTTY10Q9BZA0 68 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 INPP5EQ9NRR6 644 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 ERVK13-1Q9NX77 482 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 EXOSC1Q9Y3B2 195 aaKnown RBP15.54■□□□□ 0.08
CCDC78-201ENST00000293889 TMEM14AQ9Y6G1 99 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 DOPEY1Q5JWR5 2465 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 IQCMA0A1B0GVH7 501 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 ZNF503-AS2A6NEH8 195 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 PRR32B1ATL7 298 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 CD300CQ08708 224 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 FAM27E3Q08E93 113 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 CDSNQ15517 529 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 OR7E24Q6IFN5 339 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 CFAP77Q6ZQR2 320 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 OR2AJ1Q8NGZ0 328 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 ST7LQ8TDW4 575 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 ITLN2Q8WWU7 325 aaPredicted RBP15.54■□□□□ 0.08
CCDC78-201ENST00000293889 BOD1Q96IK1 185 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 SLC30A2Q9BRI3 323 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 ABHD6Q9BV23 337 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 SMURF1Q9HCE7 757 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 ELOVL5Q9NYP7 299 aa15.54■□□□□ 0.08
CCDC78-201ENST00000293889 GDF2Q9UK05 429 aaPredicted RBP15.54■□□□□ 0.08
CCDC78-201ENST00000293889 SPTBN1Q01082 2364 aaKnown RBP15.53■□□□□ 0.08
CCDC78-201ENST00000293889 RER1O15258 196 aa15.53■□□□□ 0.08
CCDC78-201ENST00000293889 HLA-HP01893 362 aa15.53■□□□□ 0.08
CCDC78-201ENST00000293889 MMP7P09237 267 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms