RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TUSC2O75896 110 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 PIAS2O75928 621 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 FAM157BP0CG42 384 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ALOX5APP20292 161 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 PPICP45877 212 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ZNF121P58317 390 aaPredicted RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 CLINT1Q14677 625 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 GNMTQ14749 295 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 C3AR1Q16581 482 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 TMEM201Q5SNT2 666 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 OGFOD3Q6PK18 319 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ZNF695Q8IW36 515 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 OR2AE1Q8NHA4 323 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 SIGLEC11Q96RL6 698 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ABHD6Q9BV23 337 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 TWSG1Q9GZX9 223 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 DNTTIP1Q9H147 329 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 OBP2BQ9NPH6 170 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 OCIAD1Q9NX40 245 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 SLC23A1Q9UHI7 598 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 LRP12Q9Y561 859 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 DENND4CQ5VZ89 1909 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 MYO7BQ6PIF6 2116 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 A0A087WUJ7 227 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ARGFXA6NJG6 315 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 LMO7DNF2Z398 122 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 RGS11O94810 467 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 OR8U9P0C7N5 309 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 FAHP16930 419 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ACHEP22303 614 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 CAMLGP49069 296 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ASCL1P50553 236 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 RAB2AP61019 212 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 LINC00303Q3SY05 128 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ANKRD16Q6P6B7 361 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 ZNF574Q6ZN55 896 aaPredicted RBP4.32□□□□□ -1.72
UBR1-201ENST00000290650 MISPQ8IVT2 679 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 GVQW1Q8N7I0 195 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 GLYATL2Q8WU03 294 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 UPRTQ96BW1 309 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 TSPAN32Q96QS1 320 aa4.32□□□□□ -1.72
UBR1-201ENST00000290650 PYCARD-AS1I3L0S3 204 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 NR2C1P13056 603 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MYBPHQ13203 477 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MFAP5Q13361 173 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 IRF3Q14653 427 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 COL19A1Q14993 1142 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 WDR38Q5JTN6 314 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 ZNF425Q6IV72 752 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 SYT13Q7L8C5 426 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 SGPP2Q8IWX5 399 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 SPAG16Q8N0X2 631 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 ASB17Q8WXJ9 295 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 OR2M2Q96R28 347 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 GON7Q9BXV9 100 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 FGF20Q9NP95 211 aaPredicted RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 UFSP2Q9NUQ7 469 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 PADI1Q9ULC6 663 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MOKQ9UQ07 419 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 ZNF407Q9C0G0 2248 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 PRUNE2Q8WUY3 3088 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 RAB40ALP0C0E4 278 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 PVALBP20472 110 aaPredicted RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 FCARP24071 287 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 SNRPNP63162 240 aaKnown RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 PXDC1Q5TGL8 231 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 LYPD8Q6UX82 237 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 ZNF813Q6ZN06 617 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 RPS19BP1Q86WX3 136 aaKnown RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 GRAMD2AQ8IUY3 354 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 RAB40AQ8WXH6 277 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 WDR34Q96EX3 536 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 ZC3H10Q96K80 434 aaKnown RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 MIXL1Q9H2W2 232 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 ANKRD19PQ9H560 264 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 PLXNA3P51805 1871 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 COL6A6A6NMZ7 2263 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 CXCL13O43927 109 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 GDF9O60383 454 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 CCL4P13236 92 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 CTLA4P16410 223 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 NFYAP23511 347 aaPredicted RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 CRYBA2P53672 197 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 DCAF7P61962 342 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 MC2RQ01718 297 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 DYRK1AQ13627 763 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 CLEC9AQ6UXN8 241 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 CXorf67Q86X51 503 aaPredicted RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 OR5M9Q8NGP3 310 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 FOXRED1Q96CU9 486 aaPredicted RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 LIN37Q96GY3 246 aaPredicted RBP4.31□□□□□ -1.72
UBR1-201ENST00000290650 MAP6Q96JE9 813 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 RGCCQ9H4X1 137 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 FAM86C1Q9NVL1 165 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 CLEC1BQ9P126 229 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 DUSP13Q9UII6 198 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 GJE1A6NN92 205 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 STK17BO94768 372 aa4.31□□□□□ -1.72
UBR1-201ENST00000290650 POU2F2P09086 479 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms