RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SLC22A13Q9Y226 551 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 DFFBO76075 338 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 PSMB6P28072 239 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 CRABP1P29762 137 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 ZNF74Q16587 644 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 KIAA0895LQ68EN5 471 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 UBAC2Q8NBM4 344 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 OR4D9Q8NGE8 314 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 PPP1R1CQ8WVI7 109 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 TAS2R5Q9NYW4 299 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 ANKRD36A6QL64 1941 aa11.4□□□□□ -0.58
SLC6A1-201ENST00000287766 MT-ND4LP03901 98 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 EPXP11678 715 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 DIO1P49895 249 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 SNRPNP63162 240 aaKnown RBP11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 SLC36A2Q495M3 483 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 OR2T2Q6IF00 324 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 OR52W1Q6IF63 320 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 TMEM123Q8N131 208 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 NECAP1Q8NC96 275 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 SMIM19Q96E16 107 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 TCTN2Q96GX1 697 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 FAM60AQ9NP50 221 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 SLC39A9Q9NUM3 307 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 MN1Q10571 1320 aaPredicted RBP11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 MGST1P10620 155 aaKnown RBP11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 Q6ZS52 159 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 FAM185AQ8N0U4 392 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 OR2L13Q8N349 312 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 OR9K2Q8NGE7 335 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 PELI1Q96FA3 418 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 AKR1E2Q96JD6 320 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 TMEM59Q9BXS4 323 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 ZNF160Q9HCG1 818 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 ISYNA1Q9NPH2 558 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 C1orf123Q9NWV4 160 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 PCDHB10Q9UN67 800 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 CEBPZOSA8MTT3 80 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 G3V3Y1 287 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 HRKO00198 91 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 YKT6O15498 198 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 TBX19O60806 448 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 CD3DP04234 171 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 PTAFRP25105 342 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 BLVRBP30043 206 aaPredicted RBP11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 MRPS21P82921 87 aaKnown RBP11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 SHEQ5VZ18 495 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 C1orf87Q8N0U7 546 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 WDFY2Q96P53 400 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 SORCS2Q96PQ0 1159 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 EXOSC3Q9NQT5 275 aaKnown RBP11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 CYSLTR2Q9NS75 346 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 TP53TG5Q9Y2B4 290 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 CXorf51AA0A1B0GTR3 108 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 P2RY10O00398 339 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 NXPH3O95157 252 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 HBE1P02100 147 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 FOLR1P15328 257 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 MGMTP16455 207 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 OR1D5P58170 312 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 TLE4Q04727 773 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 RPL18Q07020 188 aaKnown RBP11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 CAMK2DQ13557 499 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 LINC00303Q3SY05 128 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 SFRP5Q5T4F7 317 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 BPIFCQ8NFQ6 507 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 OR2G3Q8NGZ4 309 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 CPNE4Q96A23 557 aaPredicted RBP11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 LCORQ96JN0 433 aaPredicted RBP11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 CDCA3Q99618 268 aaPredicted RBP11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 WDR76Q9H967 626 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 MIOXQ9UGB7 285 aa11.39□□□□□ -0.59
SLC6A1-201ENST00000287766 C4orf51C9J302 202 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 CYB5BO43169 146 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 KLK3P07288 261 aaPredicted RBP11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 ZNF43P17038 809 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 LAP3P28838 519 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 BDH1Q02338 343 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 PLP2Q04941 152 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 VAMP3Q15836 100 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 ZNF628Q5EBL2 1059 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 PRAMEF20Q5VT98 475 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 ADGRG3Q86Y34 549 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 ADAMTS18Q8TE60 1221 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 PTP4A1Q93096 173 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 SGK3Q96BR1 496 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 SPACA5Q96QH8 159 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 PCDHGA1Q9Y5H4 931 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 SIRT4Q9Y6E7 314 aaPredicted RBP11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 H0Y8G0 127 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 LANCL1O43813 399 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 SLC6A8P48029 635 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 SCGB2A2Q13296 93 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 DBX2Q6ZNG2 339 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 GPR137CQ8N3F9 429 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 EID2Q8N6I1 236 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 KCNG2Q9UJ96 466 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 TMED7-TICAM2A0A0A6YYA0 188 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 IFITM5A6NNB3 132 aa11.38□□□□□ -0.59
SLC6A1-201ENST00000287766 H7BYZ3 331 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms