RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 OGG1O15527 345 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 RAD51DO75771 328 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 GBX2P52951 348 aaPredicted RBP16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 TBRG1Q3YBR2 411 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 CCDC58Q4VC31 144 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 CCDC92Q53HC0 331 aaPredicted RBP16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 ELFN2Q5R3F8 820 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 SFRP5Q5T4F7 317 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 DPPA2Q7Z7J5 298 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 FJX1Q86VR8 437 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 CCDC36Q8IYA8 594 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 TMEM203Q969S6 136 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 DCUN1D5Q9BTE7 237 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 RNF167Q9H6Y7 350 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 GALNT8Q9NY28 637 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 JKAMPQ9P055 326 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 SLC5A6Q9Y289 635 aa16.53■□□□□ 0.24
PDLIM3-202ENST00000284770 EEF1E1-BLOC1S5C9J1V9 151 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 EEF1E1O43324 174 aaKnown RBP16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 SGCEO43556 437 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 PRB1P04280 392 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 H2BFMP0C1H6 154 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 CD53P19397 219 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 RIDAP52758 137 aaKnown RBP16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 PSG4Q00888 419 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 MRPL28Q13084 256 aaKnown RBP16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 CDK5R1Q15078 307 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 IGFBP7Q16270 282 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 RELL2Q8NC24 303 aaPredicted RBP16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 RPS4Y2Q8TD47 263 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 HAVCR2Q8TDQ0 301 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 PGLYRP3Q96LB9 341 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 OR2H1Q9GZK4 316 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 DDX28Q9NUL7 540 aaKnown RBP16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 PLEK2Q9NYT0 353 aa16.52■□□□□ 0.24
PDLIM3-202ENST00000284770 SMG1Q96Q15 3661 aaKnown RBP16.52■□□□□ 0.23
PDLIM3-202ENST00000284770 A0A1B0GUH1 482 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 RPP14O95059 124 aaKnown RBP16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 HLA-HP01893 362 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 HOXB1P14653 301 aaPredicted RBP16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 ZNF182P17025 639 aaPredicted RBP16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 PSMB10P40306 273 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 TGM4P49221 684 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 FABP5Q01469 135 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 RAB35Q15286 201 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 TSC22D1Q15714 1073 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 RPL22L1Q6P5R6 122 aaKnown RBP16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 NANOS1Q8WY41 292 aaKnown RBP16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 ATF6BQ99941 703 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 RNF121Q9H920 327 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 ZNF503-AS2A6NEH8 195 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 UBL3O95164 117 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 GNLYP22749 145 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 DCTDP32321 178 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 ARR3P36575 388 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 TAF13Q15543 124 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 ZNF774Q6NX45 483 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 ARL9Q6T311 187 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 STAC2Q6ZMT1 411 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 ZNF843Q8N446 348 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 C17orf78Q8N4C9 275 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 PRR7Q8TB68 274 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 SMIM19Q96E16 107 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 DCLRE1CQ96SD1 692 aaKnown RBP16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 TMED9Q9BVK6 235 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 HDHD5Q9BXW7 423 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 HDHD2Q9H0R4 259 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 WNT5BQ9H1J7 359 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 NIPAL2Q9H841 368 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 B3GNT2Q9NY97 397 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 FBXL3Q9UKT7 428 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 SSR3Q9UNL2 185 aa16.51■□□□□ 0.23
PDLIM3-202ENST00000284770 TRDV1A0A1B0GX56 115 aa16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 SYNGR3O43761 229 aa16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 DOK2O60496 412 aa16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 CD1AP06126 327 aa16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 CD79AP11912 226 aa16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 PSMB1P20618 241 aaKnown RBP16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 UGT2B10P36537 528 aa16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 NANOS3P60323 173 aaKnown RBP16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 RAB1AP62820 205 aa16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 GRB2P62993 217 aaKnown RBP16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 TMEM53Q6P2H8 277 aa16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 BHLHA15Q7RTS1 189 aaPredicted RBP16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 HSD17B8Q92506 261 aa16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 EXOSC4Q9NPD3 245 aaKnown RBP16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 TXNL4BQ9NX01 149 aaKnown RBP16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 ELOVL5Q9NYP7 299 aa16.5■□□□□ 0.23
PDLIM3-202ENST00000284770 HLA-DPB1P04440 258 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 GALP22466 123 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 FGF9P31371 208 aaPredicted RBP16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 UQCRFS1P47985 274 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 UBE2NP61088 152 aaKnown RBP16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 ADORA2A-AS1P86434 159 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 SLC3A1Q07837 685 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 ECH1Q13011 328 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 PABPC1L2AQ5JQF8 200 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 OR1F12Q8NHA8 337 aa16.49■□□□□ 0.23
PDLIM3-202ENST00000284770 AKR7LQ8NHP1 331 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms