RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 DHODHQ02127 395 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 BCO1Q9HAY6 547 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 SLC23A1Q9UHI7 598 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 PSORS1C1Q9UIG5 152 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 PPP1R3CQ9UQK1 317 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 TRAPPC1Q9Y5R8 145 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 GASTP01350 101 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 RAF1P04049 648 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 SLC5A2P31639 672 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 MLF1P58340 268 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CTU2Q2VPK5 515 aaKnown RBP8.01□□□□□ -1.13
NIPBL-201ENST00000282516 DCXRQ7Z4W1 244 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 CLEC14AQ86T13 490 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 ZC3HAV1LQ96H79 300 aaKnown RBP8.01□□□□□ -1.13
NIPBL-201ENST00000282516 DCBLD2Q96PD2 775 aa8.01□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF320A2RRD8 509 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 WTIPA6NIX2 430 aaPredicted RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 C1QBP02746 253 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 PMCHP20382 165 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 MAOBP27338 520 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 EPHA2P29317 976 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 FDX2Q6P4F2 183 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 LCN15Q6UWW0 184 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 PCNPQ8WW12 178 aaKnown RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 EDARADDQ8WWZ3 215 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 SEC11CQ9BY50 192 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 GSX1Q9H4S2 264 aaPredicted RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 UBE2L5PA0A1B0GUS4 154 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 LOC107986453A0A1B0GWG9 222 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 PSMB6P28072 239 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 SYPL1Q16563 259 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 LPAL2Q16609 132 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 ZFPM2Q8WW38 1151 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 LCORQ96JN0 433 aaPredicted RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF2Q9BSG1 426 aaPredicted RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 IER2Q9BTL4 223 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 GSX2Q9BZM3 304 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 C12orf49Q9H741 205 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 PVRP15151 417 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 CD80P33681 288 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 ADRA1AP35348 466 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 DRAM2Q6UX65 266 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 RBPJLQ9UBG7 517 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF354AO60765 605 aaPredicted RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 DUS4LO95620 317 aaKnown RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 BMP1P13497 986 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 SPCS3P61009 180 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 DOC2BQ14184 412 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 GDF7Q7Z4P5 450 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 C17orf78Q8N4C9 275 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 PRSS16Q9NQE7 514 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF17P17021 662 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 RBP2P50120 134 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 PCBP4P57723 403 aaKnown RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 EXOSC2Q13868 293 aaKnown RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 DYNC2LI1Q8TCX1 351 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 SNX11Q9Y5W9 270 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 SHHQ15465 462 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 RPEL1Q2QD12 228 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 HSD11B1LQ7Z5J1 315 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 MDGA1Q8NFP4 955 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 OR13F1Q8NGS4 319 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 TMED6Q8WW62 240 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 MRPS24Q96EL2 167 aaKnown RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 POU2F2P09086 479 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 BMPR1AP36894 532 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 PPOXP50336 477 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 PPP1CAP62136 330 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF528Q3MIS6 628 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 PRAMEF20Q5VT98 475 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 LSRQ86X29 649 aaPredicted RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 ZC3H3Q8IXZ2 948 aaKnown RBP8□□□□□ -1.13
NIPBL-201ENST00000282516 F5H697 171 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 RD3LP0DJH9 198 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 IHHQ14623 411 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 P2RY12Q9H244 342 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 CHST11Q9NPF2 352 aa8□□□□□ -1.13
NIPBL-201ENST00000282516 CCDC187A0A096LP49 1063 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 DHRS7BQ6IAN0 325 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 MAML2Q8IZL2 1156 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 C12orf76Q8N812 135 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 OR5AP2Q8NGF4 316 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 NPAS1Q99742 590 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 RALYQ9UKM9 306 aaKnown RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 LAMB4A4D0S4 1761 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 SIGLEC6O43699 453 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 RPL12P30050 165 aaKnown RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 APOBEC1P41238 236 aaKnown RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 UQCC3Q6UW78 93 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 RANBP10Q6VN20 620 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 ANGPTL5Q86XS5 388 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 BHLHE23Q8NDY6 225 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 GRAMD2BQ96HH9 432 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 NACAE9PAV3 2078 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 TMEM129A0AVI4 362 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 NPY1RP25929 384 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 CXCL12P48061 93 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 MLF2Q15773 248 aaPredicted RBP7.99□□□□□ -1.13
NIPBL-201ENST00000282516 NRG4Q8WWG1 115 aa7.99□□□□□ -1.13
NIPBL-201ENST00000282516 ZDHHC16Q969W1 377 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms