RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 NR0B1P51843 470 aaKnown RBP11.56□□□□□ -0.56
C9orf3-201ENST00000277198 FGL1Q08830 312 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ZP4Q12836 540 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 PCK2Q16822 640 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 C1QL3Q5VWW1 255 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ASPHD2Q6ICH7 369 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 NHLRC1Q6VVB1 395 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ZNF704Q6ZNC4 412 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-201ENST00000277198 SLC35D2Q76EJ3 337 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 NDUFAF7Q7L592 441 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ADGRE4PQ86SQ3 457 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 BPHLQ86WA6 291 aaPredicted RBP11.56□□□□□ -0.56
C9orf3-201ENST00000277198 C9orf40Q8IXQ3 194 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ZNF441Q8N8Z8 693 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ZNF248Q8NDW4 579 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 OR4D10Q8NGI6 311 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 OR5M1Q8NGP8 315 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 OR6K3Q8NGY3 331 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 GPR119Q8TDV5 335 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM234Q8WY98 164 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 SLC25A36Q96CQ1 311 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 SEH1LQ96EE3 360 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 SLC41A2Q96JW4 573 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 KLHDC3Q9BQ90 382 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 ABHD6Q9BV23 337 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 REG4Q9BYZ8 158 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 PPA2Q9H2U2 334 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 CDCP1Q9H5V8 836 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 SDHAF2Q9NX18 166 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 SLC22A13Q9Y226 551 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 R4GMQ9 66 aa11.56□□□□□ -0.56
C9orf3-201ENST00000277198 RFPL4AA6NLU0 287 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 A8MUA0 341 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 D6RAR5 112 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 RFPL4AL1F8VTS6 287 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 LDLRAD4O15165 306 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 FADS1O60427 444 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 SRSF10O75494 262 aaKnown RBP11.55□□□□□ -0.56
C9orf3-201ENST00000277198 KDM4BO94953 1096 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 GPANK1O95872 356 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 HRGP04196 525 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 CD74P04233 296 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 CTLA4P16410 223 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 RAB6AP20340 208 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 HSD11B2P80365 405 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 ODF4Q2M2E3 257 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 C1orf100Q5SVJ3 147 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 YOD1Q5VVQ6 348 aaPredicted RBP11.55□□□□□ -0.56
C9orf3-201ENST00000277198 RAB12Q6IQ22 244 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 GSG1LQ6UXU4 331 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 CHMP1BQ7LBR1 199 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 PRSS42Q7Z5A4 293 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 BIVMQ86UB2 503 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 SLC51BQ86UW2 128 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 PRR22Q8IZ63 422 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 EIF4E3Q8N5X7 224 aaKnown RBP11.55□□□□□ -0.56
C9orf3-201ENST00000277198 CCDC120Q96HB5 630 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 NUDT22Q9BRQ3 303 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 PFDN2Q9UHV9 154 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 GLS2Q9UI32 602 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 LRP12Q9Y561 859 aa11.55□□□□□ -0.56
C9orf3-201ENST00000277198 GOSR2O14653 212 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 RAB3DO95716 219 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 ZNF35P13682 527 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 MPZP25189 248 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 ABCD3P28288 659 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 PTGS2P35354 604 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 OR1D4P47884 311 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 SLC26A5P58743 744 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 GABREP78334 506 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 GUCA2AQ02747 115 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 CFHR1Q03591 330 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 SRSF4Q08170 494 aaKnown RBP11.54□□□□□ -0.56
C9orf3-201ENST00000277198 EIF2B1Q14232 305 aaKnown RBP11.54□□□□□ -0.56
C9orf3-201ENST00000277198 GK2Q14410 553 aaPredicted RBP11.54□□□□□ -0.56
C9orf3-201ENST00000277198 RTP5Q14D33 572 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 ZMYND11Q15326 602 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 NSDHLQ15738 373 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 C4orf46Q504U0 113 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 GLYATL3Q5SZD4 288 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 PHF19Q5T6S3 580 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM244Q5VVB8 128 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 OVCH2Q7RTZ1 564 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 SLC25A44Q96H78 314 aaPredicted RBP11.54□□□□□ -0.56
C9orf3-201ENST00000277198 DPYSL5Q9BPU6 564 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 ARL6Q9H0F7 186 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM138Q9NPI0 162 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 CYB5R1Q9UHQ9 305 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 KCNMB2Q9Y691 235 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 MGAQ8IWI9 3026 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 A0A1B0GW55 424 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM82A0PJX8 343 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 TMEM8BA6NDV4 472 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 CYB5AP00167 134 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 OR4E1P0C645 316 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 DUX4L2P0CJ85 424 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 DUX4L3P0CJ86 424 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 DUX4L4P0CJ87 422 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 DUX4L5P0CJ88 424 aa11.54□□□□□ -0.56
C9orf3-201ENST00000277198 DUX4L6P0CJ89 424 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms