RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 UMAD1C9J7I0 102 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 LMX1BO60663 402 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 SLC34A2O95436 690 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 KNG1P01042 644 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 GNB3P16520 340 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 SULT1A1P50225 295 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 PMPCAQ10713 525 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 ELAVL3Q14576 367 aaKnown RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 OR14K1Q8NGZ2 314 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 SFXN5Q8TD22 340 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 GPX8Q8TED1 209 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 C15orf40Q8WUR7 153 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 GTF3AQ92664 365 aaKnown RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 MRGPRX3Q96LB0 322 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 SLC25A21Q9BQT8 299 aaPredicted RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 ELOVL3Q9HB03 270 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 CYTL1Q9NRR1 136 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 TREM2Q9NZC2 230 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 PISDQ9UG56 409 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 CACFD1Q9UGQ2 172 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 KIF26BQ2KJY2 2108 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 NOTCH4Q99466 2003 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 LOC100289279A0A1B0GTE1 492 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 FGF19O95750 216 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 SLC25A4P12235 298 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 PRDX1Q06830 199 aaKnown RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 CHAF1BQ13112 559 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 MEP1BQ16820 701 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 MIDNQ504T8 468 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 WDR38Q5JTN6 314 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 PRSS41Q7RTY9 318 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 NRROSQ86YC3 692 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 C17orf78Q8N4C9 275 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 OR2A1Q8NGT9 310 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 TCEAL2Q9H3H9 227 aaPredicted RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 SLC33A1O00400 549 aaPredicted RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 SDCBPO00560 298 aaPredicted RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 DBIP07108 87 aaKnown RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 SPARCP09486 303 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 AGAP20933 346 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 ZBTB25P24278 435 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 GNALP38405 381 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 PDGFRLQ15198 375 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 HNRNPA1L2Q32P51 320 aaKnown RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 RPL13AP3Q6NVV1 102 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 SPNS3Q6ZMD2 512 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 ERN2Q76MJ5 926 aaKnown RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 ZNF550Q7Z398 422 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 ZNF679Q8IYX0 411 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 OR2L5Q8NG80 312 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 OR2I1PQ8NGU4 316 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 ZNF417Q8TAU3 575 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 MKKSQ9NPJ1 570 aaPredicted RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 STARD5Q9NSY2 213 aa11.55□□□□□ -0.56
HERC6-202ENST00000273960 GAR1Q9NY12 217 aaKnown RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 LSM5Q9Y4Y9 91 aaKnown RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 MRPS18BQ9Y676 258 aaKnown RBP11.55□□□□□ -0.56
HERC6-202ENST00000273960 FANCMQ8IYD8 2048 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 TERTO14746 1132 aaKnown RBP11.54□□□□□ -0.56
HERC6-202ENST00000273960 UPK3AO75631 287 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 CD14P08571 375 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 RAB5CP51148 216 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 HGFACQ04756 655 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 IRF4Q15306 451 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 EEF1A1P5Q5VTE0 462 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 RNF113BQ8IZP6 322 aaKnown RBP11.54□□□□□ -0.56
HERC6-202ENST00000273960 ZNF681Q96N22 645 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 FAM83CQ9BQN1 747 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 OCSTAMPQ9BR26 566 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 PELI2Q9HAT8 420 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 LANCL2Q9NS86 450 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 HAO2Q9NYQ3 351 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 MED12Q93074 2177 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 ZNF726A6NNF4 738 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 CLEC3AO75596 197 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 OR2C1O95371 312 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 GIMD1P0DJR0 217 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 HTR5AP47898 357 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 PRSS35Q8N3Z0 413 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 PAQR4Q8N4S7 273 aaPredicted RBP11.54□□□□□ -0.56
HERC6-202ENST00000273960 MFSD8Q8NHS3 518 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 SLC2A12Q8TD20 617 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 G6PC3Q9BUM1 346 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 CES1P1Q9UKY3 287 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 EDDM13A0A1B0GTR0 161 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 HTR2CP28335 458 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 DUSP8Q13202 625 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 MLC1Q15049 377 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 SLC25A44Q96H78 314 aaPredicted RBP11.54□□□□□ -0.56
HERC6-202ENST00000273960 CMTM3Q96MX0 182 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 DOK5Q9P104 306 aa11.54□□□□□ -0.56
HERC6-202ENST00000273960 FRMPD3Q5JV73 1810 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 DOCK8Q8NF50 2099 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 FREM3P0C091 2139 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 OR4C45A6NMZ5 311 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 PHYHO14832 338 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 TCAPO15273 167 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 LINC01565O15544 149 aa11.53□□□□□ -0.56
HERC6-202ENST00000273960 TNFSF12O43508 249 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms