RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 CFAP77Q6ZQR2 320 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 OR1J2Q8NGS2 313 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 CXorf58Q96LI9 332 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 GPER1Q99527 375 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 RARRES3Q9UL19 164 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 BOD1L1Q8NFC6 3051 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 ACSM4P0C7M7 580 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 CATSPERDQ86XM0 798 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 BATF2Q8N1L9 274 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 OR10K1Q8NGX5 313 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 SLX1AQ9BQ83 275 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 MAB21L2Q9Y586 359 aa14.83□□□□□ -0.04
VPS54-201ENST00000272322 NR0B2Q15466 257 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 TMEM41AQ96HV5 264 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 NPDC1Q9NQX5 325 aaPredicted RBP14.82□□□□□ -0.04
VPS54-201ENST00000272322 ETV7Q9Y603 341 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 ZNF736B4DX44 427 aaPredicted RBP14.82□□□□□ -0.04
VPS54-201ENST00000272322 MPIG6BO95866 241 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 TGM6O95932 706 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 IGF2P01344 180 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 CLDN6P56747 220 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 SMAD4Q13485 552 aaKnown RBP14.82□□□□□ -0.04
VPS54-201ENST00000272322 ZNF626Q68DY1 528 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 FTCDNL1E5RQL4 147 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 PDGFAP04085 211 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 AVPR2P30518 371 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 C3P1Q6ZMU1 363 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 ANGPTL5Q86XS5 388 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 OR2AK2Q8NG84 335 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 R4GMQ9 66 aa14.82□□□□□ -0.04
VPS54-201ENST00000272322 IFI6P09912 130 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 DCDP81605 110 aaKnown RBP14.81□□□□□ -0.04
VPS54-201ENST00000272322 AWAT2Q6E213 333 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 CADM4Q8NFZ8 388 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 OR4K17Q8NGC6 315 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 RPS4Y2Q8TD47 263 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 ASB10Q8WXI3 467 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 PRMT8Q9NR22 394 aaPredicted RBP14.81□□□□□ -0.04
VPS54-201ENST00000272322 CFAP47Q6ZTR5 3102 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 DSPP15924 2871 aaKnown RBP14.81□□□□□ -0.04
VPS54-201ENST00000272322 C13orf42A0A1B0GVH6 325 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 TMEM82A0PJX8 343 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 NAP1L6A6NFF2 107 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 TMEM200CA6NKL6 621 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 C10orf142B7Z368 130 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 SULT1B1O43704 296 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 ZNF432O94892 652 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 WDPCPO95876 746 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 PMP2P02689 132 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 CCL4P13236 92 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 FAM57BQ71RH2 274 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 ASB17Q8WXJ9 295 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 CCDC74BQ96LY2 380 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 CHST11Q9NPF2 352 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 G6PC2Q9NQR9 355 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 B3GNT2Q9NY97 397 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 ZNF319Q9P2F9 582 aa14.81□□□□□ -0.04
VPS54-201ENST00000272322 EEF1E1-BLOC1S5C9J1V9 151 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 ZNF205O95201 554 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 ACHEP22303 614 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 BAMBIQ13145 260 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 GALNTL5Q7Z4T8 443 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 ST7LQ8TDW4 575 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 LIN37Q96GY3 246 aaPredicted RBP14.8□□□□□ -0.04
VPS54-201ENST00000272322 PLEKHA1Q9HB21 404 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 SDHAF3Q9NRP4 125 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 KLK13Q9UKR3 277 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 F5H5P2 479 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 HLA-AP01891 365 aaKnown RBP14.8□□□□□ -0.04
VPS54-201ENST00000272322 HCKP08631 526 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 CSF1P09603 554 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 SHBQ15464 509 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 RHBDD2Q6NTF9 364 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 TRAPPC6BQ86SZ2 158 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 SLC38A6Q8IZM9 456 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 CLEC1AQ8NC01 280 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 DDIT4LQ96D03 193 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 MS4A7Q9GZW8 240 aaPredicted RBP14.8□□□□□ -0.04
VPS54-201ENST00000272322 MYOTQ9UBF9 498 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 PHYHO14832 338 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 GUSBP08236 651 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 GALNSP34059 522 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 TEX30Q5JUR7 227 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 TMEM81Q6P7N7 255 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 PLXDC2Q6UX71 529 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 FJX1Q86VR8 437 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 ZNF584Q8IVC4 421 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 UEVLDQ8IX04 471 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 ZNF283Q8N7M2 679 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 TMEM104Q8NE00 496 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 HGDQ93099 445 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 MR1Q95460 341 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 UCK1Q9HA47 277 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 ZNF407Q9C0G0 2248 aa14.8□□□□□ -0.04
VPS54-201ENST00000272322 ZFHX4Q86UP3 3567 aa14.79□□□□□ -0.04
VPS54-201ENST00000272322 MCRIP1C9JLW8 97 aa14.79□□□□□ -0.04
VPS54-201ENST00000272322 PRAF2O60831 178 aa14.79□□□□□ -0.04
VPS54-201ENST00000272322 TTRP02766 147 aa14.79□□□□□ -0.04
VPS54-201ENST00000272322 CD1AP06126 327 aa14.79□□□□□ -0.04
VPS54-201ENST00000272322 OR4E1P0C645 316 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms