RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 CEBPZOSA8MTT3 80 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 HYAL3O43820 417 aaPredicted RBP12.37□□□□□ -0.43
NPC1-201ENST00000269228 IFNA17P01571 189 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 MDGA2Q7Z553 956 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.37□□□□□ -0.43
NPC1-201ENST00000269228 ZNF321PQ8N8H1 164 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 BOD1Q96IK1 185 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 ZCCHC4Q9H5U6 513 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 BCO1Q9HAY6 547 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 CDK5R1Q15078 307 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 CLPPQ16740 277 aaPredicted RBP12.37□□□□□ -0.43
NPC1-201ENST00000269228 STEAP1BQ6NZ63 245 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 NUBPLQ8TB37 319 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 REEP6Q96HR9 211 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 NDUFB11Q9NX14 153 aa12.37□□□□□ -0.43
NPC1-201ENST00000269228 ENSAO43768 121 aaKnown RBP12.36□□□□□ -0.43
NPC1-201ENST00000269228 NDUFB7P17568 137 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 PSG6Q00889 435 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 ZNF141Q15928 474 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 ELFN2Q5R3F8 820 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 OR2A2Q6IF42 318 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 HAGHLQ6PII5 290 aaPredicted RBP12.36□□□□□ -0.43
NPC1-201ENST00000269228 PRSS45Q7RTY3 260 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 NKX3-1Q99801 234 aaPredicted RBP12.36□□□□□ -0.43
NPC1-201ENST00000269228 MFFQ9GZY8 342 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 TMEFF2Q9UIK5 374 aaPredicted RBP12.36□□□□□ -0.43
NPC1-201ENST00000269228 PCYT1BQ9Y5K3 369 aaPredicted RBP12.36□□□□□ -0.43
NPC1-201ENST00000269228 HPP00738 406 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 NRASP01111 189 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 PMP2P02689 132 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 NFYBP25208 207 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 C21orf58P58505 322 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 FMODQ06828 376 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 DMRTC1Q5HYR2 192 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 SIAH3Q8IW03 269 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 SMIM19Q96E16 107 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 SVILO95425 2214 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 OR6C6A6NF89 314 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 XRCC2O43543 280 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 SPDEFO95238 335 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 CHRM2P08172 466 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 PTAFRP25105 342 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 OR56B4Q8NH76 319 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 GIMAP1Q8WWP7 306 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 C10orf90Q96M02 699 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 FAM234AQ9H0X4 552 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 E9PI62 339 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 HTR2BP41595 481 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 RAB31Q13636 194 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 AKR1C8PQ5T2L2 129 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 TMPRSS7Q7RTY8 843 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 TMEM185AQ8NFB2 350 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 VSTM2LQ96N03 204 aa12.36□□□□□ -0.43
NPC1-201ENST00000269228 FOXS1O43638 330 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 TUSC2O75896 110 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 PTGER4P35408 488 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 ZNF133P52736 654 aaPredicted RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 ZNF121P58317 390 aaPredicted RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 SCCPDHQ8NBX0 429 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 SLC25A46Q96AG3 418 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 PCM1Q15154 2024 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 H7C2Y5 167 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 IMPA2O14732 288 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 TNFSF12O43508 249 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 ZNF728P0DKX0 622 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 PCBP3P57721 371 aaKnown RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 FOXL2P58012 376 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 TAS2R20P59543 309 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 RPL23AP62750 156 aaKnown RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 MSMO1Q15800 293 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 STPG1Q5TH74 334 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 STEAP3Q658P3 488 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 GTPBP8Q8N3Z3 284 aaPredicted RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 DMBX1Q8NFW5 382 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 OR2G2Q8NGZ5 317 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 OR10D3Q8NH80 312 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 M1APQ8TC57 530 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 ORAI1Q96D31 301 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 SMIM3Q9BZL3 60 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 SLCO5A1Q9H2Y9 848 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 RNF212BA8MTL3 300 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 SSX5O60225 188 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 PCSK6P29122 969 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 PTPN6P29350 595 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 CAMK2BQ13554 666 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 PCK2Q16822 640 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 ISXQ2M1V0 245 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 ZNF718Q3SXZ3 478 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 SLC25A45Q8N413 288 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 ZNF764Q96H86 408 aaPredicted RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 PLEKHA3Q9HB20 300 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 FGF20Q9NP95 211 aaPredicted RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 PRMT8Q9NR22 394 aaPredicted RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 CNOT1A5YKK6 2376 aaKnown RBP12.35□□□□□ -0.43
NPC1-201ENST00000269228 KIF13BQ9NQT8 1826 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 MIA3Q5JRA6 1907 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 CACNA1EQ15878 2313 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 hCG_1809904A0A1W2PP81 198 aa12.35□□□□□ -0.43
NPC1-201ENST00000269228 A0A1W2PPE2 198 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms