RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 OR5W2Q8NH69 310 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 LILRB1Q8NHL6 650 aaPredicted RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 RNF128Q8TEB7 428 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 ZNF480Q8WV37 535 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 SLC25A31Q9H0C2 315 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 PLSCR3Q9NRY6 295 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 IFNL4K9M1U5 179 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 MT-ND4LP03901 98 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 OR8G3PP0DMU2 310 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 NAGAP17050 411 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 CR2P20023 1033 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 IVDP26440 423 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 MRPL19P49406 292 aaKnown RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 TAS2R19P59542 299 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 H3F3AP84243 136 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 GGTLC2Q14390 218 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 EBPQ15125 230 aaKnown RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 BHLHA9Q7RTU4 235 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 SLC16A13Q7RTY0 426 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 TMPRSS7Q7RTY8 843 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 IQCF1Q8N6M8 205 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 UBAC2Q8NBM4 344 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 WDR20Q8TBZ3 569 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 ALG8Q9BVK2 526 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 VAPAQ9P0L0 249 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 MROH6A6NGR9 719 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 CXCL13O43927 109 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 OR2J2O76002 312 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 PF4V1P10720 104 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 SNRPEP62304 92 aaKnown RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 SUMO1P63165 101 aaKnown RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 NHLH1Q02575 133 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 TPBGQ13641 420 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 MSMO1Q15800 293 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 ADPRMQ3LIE5 342 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 ZBTB37Q5TC79 503 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 ESPNLQ6ZVH7 1005 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 FAM181AQ8N9Y4 354 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 SSC4DQ8WTU2 575 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 LYSMD1Q96S90 227 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 DDOQ99489 341 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 SLCO5A1Q9H2Y9 848 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 VSX1Q9NZR4 365 aaPredicted RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 TRAPPC2LQ9UL33 140 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 AKR7A2O43488 359 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 SMIM6P0DI80 62 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 APEHP13798 732 aaKnown RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 ZNF83P51522 516 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 RAB1AP62820 205 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 GRB2P62993 217 aaKnown RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 ADARB1P78563 741 aaKnown RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 ASAH1Q13510 395 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 SLC17A1Q14916 467 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 MRGPREQ86SM8 312 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 LRRC18Q8N456 261 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 NEIL2Q969S2 332 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 KCTD12Q96CX2 325 aaKnown RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 GRAMD2BQ96HH9 432 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 FAM71F1Q96KD3 344 aaPredicted RBP7.11□□□□□ -1.27
USP3-201ENST00000268049 SEC22CQ9BRL7 303 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 METTL9Q9H1A3 318 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 HEXA-AS1Q9H8Q6 139 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 SLC2A9Q9NRM0 540 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 GPR52Q9Y2T5 361 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 MSRB2Q9Y3D2 182 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 V9GYS6 101 aa7.11□□□□□ -1.27
USP3-201ENST00000268049 ST8SIA5O15466 376 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 AIFM1O95831 613 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 PDGFBP01127 241 aaPredicted RBP7.1□□□□□ -1.27
USP3-201ENST00000268049 ST6GAL1P15907 406 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 PNLIPRP2P54317 469 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 UBE2IP63279 158 aaKnown RBP7.1□□□□□ -1.27
USP3-201ENST00000268049 TLE4Q04727 773 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 LBHQ53QV2 105 aaPredicted RBP7.1□□□□□ -1.27
USP3-201ENST00000268049 ASCL5Q7RTU5 278 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 LILRA2Q8N149 483 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 KLHDC1Q8N7A1 406 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 ROBO4Q8WZ75 1007 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 WDR54Q9H977 334 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 RLIMQ9NVW2 624 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 HDGFL3Q9Y3E1 203 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 PTGDR2Q9Y5Y4 395 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 TMEM82A0PJX8 343 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 MCRIP1C9JLW8 97 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 OR13C7P0DN81 318 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 PTNP21246 168 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 PSMB5P28074 263 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 LAP3P28838 519 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 GDNFP39905 211 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 AGFG1P52594 562 aaKnown RBP7.1□□□□□ -1.27
USP3-201ENST00000268049 SEC61A1P61619 476 aaKnown RBP7.1□□□□□ -1.27
USP3-201ENST00000268049 RAB40BQ12829 278 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 RTP5Q14D33 572 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 UNC50Q53HI1 259 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 AWAT2Q6E213 333 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 DYNLRB2Q8TF09 96 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 GPA33Q99795 319 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 FSCN3Q9NQT6 498 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 FBXO7Q9Y3I1 522 aa7.1□□□□□ -1.27
USP3-201ENST00000268049 TET1Q8NFU7 2136 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms