RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CD300LDQ6UXZ3 194 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 TMEM91Q6ZNR0 172 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 TMEM182Q6ZP80 229 aaPredicted RBP10.48□□□□□ -0.73
VPS33A-201ENST00000267199 BCORP1Q8N888 145 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 MRGPRX1Q96LB2 322 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 FBXO34Q9NWN3 711 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 SRPK3Q9UPE1 567 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 LCTP09848 1927 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 CTSVO60911 334 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 POU3F2P20265 443 aaPredicted RBP10.48□□□□□ -0.73
VPS33A-201ENST00000267199 DRD3P35462 400 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 CASRP41180 1078 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 FASLGP48023 281 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 POLR2HP52434 150 aaKnown RBP10.48□□□□□ -0.73
VPS33A-201ENST00000267199 PLGLB1Q02325 96 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 LRRC18Q8N456 261 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 SECTM1Q8WVN6 248 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 FGF14Q92915 247 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 NAA11Q9BSU3 229 aaPredicted RBP10.48□□□□□ -0.73
VPS33A-201ENST00000267199 FAM86C1Q9NVL1 165 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 FOXJ3Q9UPW0 622 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 GAB2Q9UQC2 676 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 UNC13CQ8NB66 2214 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 ZFP92A6NM28 416 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 MSTNO14793 375 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 PHF1O43189 567 aaPredicted RBP10.48□□□□□ -0.73
VPS33A-201ENST00000267199 PLRG1O43660 514 aaKnown RBP10.48□□□□□ -0.73
VPS33A-201ENST00000267199 LRP3O75074 770 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 MTCP1P56278 107 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 RPL18Q07020 188 aaKnown RBP10.48□□□□□ -0.73
VPS33A-201ENST00000267199 DOC2BQ14184 412 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 BATF2Q8N1L9 274 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 FGF21Q9NSA1 209 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 SLCO1C1Q9NYB5 712 aa10.48□□□□□ -0.73
VPS33A-201ENST00000267199 ZNF346Q9UL40 294 aaKnown RBP10.48□□□□□ -0.73
VPS33A-201ENST00000267199 TRBV11-1A0A0K0K1C0 115 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 HSPB6O14558 160 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 GLSO94925 669 aaPredicted RBP10.47□□□□□ -0.73
VPS33A-201ENST00000267199 IL33O95760 270 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 MEOX2P50222 304 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 BIDP55957 195 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 RPL23AP62750 156 aaKnown RBP10.47□□□□□ -0.73
VPS33A-201ENST00000267199 ZNF425Q6IV72 752 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 PRSS41Q7RTY9 318 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 OR14A16Q8NHC5 309 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 TERB2Q8NHR7 220 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 FBLIM1Q8WUP2 373 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 SDHCQ99643 169 aaPredicted RBP10.47□□□□□ -0.73
VPS33A-201ENST00000267199 WWTR1Q9GZV5 400 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 KCNK15Q9H427 330 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 KLHL13Q9P2N7 655 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 GPR160Q9UJ42 338 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 NXT1Q9UKK6 140 aaKnown RBP10.47□□□□□ -0.73
VPS33A-201ENST00000267199 SRCAPQ6ZRS2 3230 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 ZNF98A6NK75 572 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 GCM2O75603 506 aaPredicted RBP10.47□□□□□ -0.73
VPS33A-201ENST00000267199 DHRS2Q13268 280 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 ZNF626Q68DY1 528 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 LYG2Q86SG7 212 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 GPR137CQ8N3F9 429 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 ELSPBP1Q96BH3 223 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 RSPRY1Q96DX4 576 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 COX14Q96I36 57 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 PBX4Q9BYU1 374 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 HS3ST3A1Q9Y663 406 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 TLCD2A6NGC4 264 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 SIGLEC6O43699 453 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 THBS2P35442 1172 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 FABP9Q0Z7S8 132 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 TESK1Q15569 626 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 ACKR1Q16570 336 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 VN1R4Q7Z5H5 301 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 OR2L13Q8N349 312 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 OR11H4Q8NGC9 324 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 ADAT1Q9BUB4 502 aaKnown RBP10.47□□□□□ -0.73
VPS33A-201ENST00000267199 SLC25A31Q9H0C2 315 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 OR10A2Q9H208 303 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 ADGRL4Q9HBW9 690 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 CA10Q9NS85 328 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 PLXNA1Q9UIW2 1896 aa10.47□□□□□ -0.73
VPS33A-201ENST00000267199 MED19A0JLT2 244 aaPredicted RBP10.46□□□□□ -0.73
VPS33A-201ENST00000267199 CD300LBA8K4G0 201 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 XRCC2O43543 280 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 CYTIPO60759 359 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 AQP8O94778 261 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 RAB11AP62491 216 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 CLEC12BQ2HXU8 276 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 CLEC9AQ6UXN8 241 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 TMPRSS11FQ6ZWK6 438 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 UBE3DQ7Z6J8 389 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 NAXDQ8IW45 347 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 ETFBKMTQ8IXQ9 262 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 MORN4Q8NDC4 146 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 OR5L1Q8NGL2 311 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 OR2G3Q8NGZ4 309 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 SPTSSAQ969W0 71 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 CPNE4Q96A23 557 aaPredicted RBP10.46□□□□□ -0.73
VPS33A-201ENST00000267199 SIGLEC11Q96RL6 698 aa10.46□□□□□ -0.73
VPS33A-201ENST00000267199 MMP24Q9Y5R2 645 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms