RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ZNF888P0CJ79 500 aaPredicted RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 OR8G3PP0DMU2 310 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 RPS10P46783 165 aaKnown RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 LSM6P62312 80 aaKnown RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 RHEBQ15382 184 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 DNLZQ5SXM8 178 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 ZNF574Q6ZN55 896 aaPredicted RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 CD163Q86VB7 1156 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 OR8U1Q8NH10 309 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 GPBAR1Q8TDU6 330 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 FAM3DQ96BQ1 224 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 DUSP15Q9H1R2 295 aaPredicted RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 FRRS1LQ9P0K9 344 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 DOK5Q9P104 306 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 COLEC10Q9Y6Z7 277 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 NUP210LQ5VU65 1888 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 LOC100289279A0A1B0GTE1 492 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 OTOL1A6NHN0 477 aaPredicted RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 ZNF432O94892 652 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 F10P00742 488 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 PEBP1P30086 187 aaKnown RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 MAS1LP35410 378 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 SULT1A2P50226 295 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 EIF5AP63241 154 aaKnown RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 ADAM8P78325 824 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 TDGQ13569 410 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 RAB11BQ15907 218 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 HEPN1Q6WQI6 88 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 PNLDC1Q8NA58 520 aaKnown RBP11.81□□□□□ -0.52
NUP54-201ENST00000264883 OR1J1Q8NGS3 322 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 THRSPQ92748 146 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 TMEM106AQ96A25 262 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 TCTN2Q96GX1 697 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 S100A13Q99584 98 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 PRRT1Q99946 306 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 RAB33BQ9H082 229 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 TAF9BQ9HBM6 251 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 LYRM4Q9HD34 91 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 SLC17A5Q9NRA2 495 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 ZDHHC8Q9ULC8 765 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 WASF3Q9UPY6 502 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 TMED7Q9Y3B3 224 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 IER3IP1Q9Y5U9 82 aa11.81□□□□□ -0.52
NUP54-201ENST00000264883 TNRC18O15417 2968 aaPredicted RBP11.8□□□□□ -0.52
NUP54-201ENST00000264883 SEC14L6B5MCN3 397 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 FBXO45P0C2W1 286 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 SMIM10L1P0DMW3 83 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 CX3CR1P49238 355 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 SLC26A5P58743 744 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 CD81P60033 236 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 CYCSP99999 105 aaKnown RBP11.8□□□□□ -0.52
NUP54-201ENST00000264883 ZNF684Q5T5D7 378 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 PAPD4Q6PIY7 484 aaKnown RBP11.8□□□□□ -0.52
NUP54-201ENST00000264883 DPY19L2P2Q6ZN68 376 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 Q6ZRG5 221 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 VN1R4Q7Z5H5 301 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 GRHL3Q8TE85 626 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 SLC22A18Q96BI1 424 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 SMIM10Q96HG1 83 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 SUCNR1Q9BXA5 334 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 SLCO5A1Q9H2Y9 848 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 ENTPD2Q9Y5L3 495 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 SPACA6W5XKT8 324 aa11.8□□□□□ -0.52
NUP54-201ENST00000264883 TMEM265A0A087WTH1 108 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 TRBV5-7A0A0A0MS05 114 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 A0A1B0GWA3 101 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 ARPC3O15145 178 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 AKR1C4P17516 323 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 TACR3P29371 465 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 MAP3K8P41279 467 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 MESP2Q0VG99 397 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 FHL1Q13642 323 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 MEF2DQ14814 521 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 OR2A2Q6IF42 318 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 HIST2H3AQ71DI3 136 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 C19orf47Q8N9M1 422 aaKnown RBP11.79□□□□□ -0.52
NUP54-201ENST00000264883 ACBD4Q8NC06 268 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 ARSGQ96EG1 525 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 MRPL37Q9BZE1 423 aaKnown RBP11.79□□□□□ -0.52
NUP54-201ENST00000264883 ADAP2Q9NPF8 381 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 MKKSQ9NPJ1 570 aaPredicted RBP11.79□□□□□ -0.52
NUP54-201ENST00000264883 DAPP1Q9UN19 280 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 CBY1Q9Y3M2 126 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 A0A1B0GTH9 108 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 PEX12O00623 359 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 UPK3AO75631 287 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 OR2C1O95371 312 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 DUS4LO95620 317 aaKnown RBP11.79□□□□□ -0.52
NUP54-201ENST00000264883 ERCC1P07992 297 aaPredicted RBP11.79□□□□□ -0.52
NUP54-201ENST00000264883 RAB1AP62820 205 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 FOXO1Q12778 655 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 RPL7L1Q6DKI1 246 aaKnown RBP11.79□□□□□ -0.52
NUP54-201ENST00000264883 TANGO2Q6ICL3 276 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 ZNF550Q7Z398 422 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 ZDHHC22Q8N966 263 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 OR4S1Q8NGB4 309 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 OR10AC1Q8NH08 325 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 ST7LQ8TDW4 575 aa11.79□□□□□ -0.52
NUP54-201ENST00000264883 ZNF775Q96BV0 537 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms