RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SLC35E1Q96K37 410 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 GAREM1Q9H706 876 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 AUNIPQ9H7T9 357 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 RAF1P04049 648 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 RBP2P50120 134 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 FABP5Q01469 135 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 DOC2BQ14184 412 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 ZNF687Q8N1G0 1237 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 ZNRF4Q8WWF5 429 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 SOX7Q9BT81 388 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 ZNF576Q9H609 170 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 ASIC5Q9NY37 505 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 A0A1B0GX78 115 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 SPNS2Q8IVW8 549 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 OR2AE1Q8NHA4 323 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 C10orf90Q96M02 699 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
COL5A3-201ENST00000264828 A0A1W2PR48 441 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 TCN2P20062 427 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 OXA1LQ15070 435 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 OR52B4Q8NGK2 314 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 SDF2Q99470 211 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 SLC23A1Q9UHI7 598 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 NDRG4Q9ULP0 352 aaKnown RBP16.4■□□□□ 0.22
COL5A3-201ENST00000264828 SIT1Q9Y3P8 196 aa16.4■□□□□ 0.22
COL5A3-201ENST00000264828 HMX2A2RU54 273 aa16.39■□□□□ 0.22
COL5A3-201ENST00000264828 ZNF354AO60765 605 aaPredicted RBP16.39■□□□□ 0.22
COL5A3-201ENST00000264828 PDGFBP01127 241 aaPredicted RBP16.39■□□□□ 0.22
COL5A3-201ENST00000264828 ACOT7LQ6ZUV0 252 aa16.39■□□□□ 0.22
COL5A3-201ENST00000264828 SIRT6Q8N6T7 355 aa16.39■□□□□ 0.22
COL5A3-201ENST00000264828 NUDCD2Q8WVJ2 157 aa16.39■□□□□ 0.22
COL5A3-201ENST00000264828 OPRM1P35372 400 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 CYB561P49447 251 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 THOC3Q96J01 351 aaKnown RBP16.39■□□□□ 0.21
COL5A3-201ENST00000264828 SLC25A37Q9NYZ2 338 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 A0A1W2PNR3 127 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 PRSS44E7EML9 344 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 RPUSD3Q6P087 351 aaKnown RBP16.39■□□□□ 0.21
COL5A3-201ENST00000264828 ORAI1Q96D31 301 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 LYRM4Q9HD34 91 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 ASH2LQ9UBL3 628 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 RNF150Q9ULK6 438 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 ADRA2CP18825 462 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 TGM1P22735 817 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 OR13D1Q8NGV5 346 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 PINX1Q96BK5 328 aaKnown RBP16.39■□□□□ 0.21
COL5A3-201ENST00000264828 ISG20L2Q9H9L3 353 aaKnown RBP16.39■□□□□ 0.21
COL5A3-201ENST00000264828 H0Y8X5 98 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 GPR171O14626 319 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 ABCD4O14678 606 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 YIF1AO95070 293 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 GLAP06280 429 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 HRH1P35367 487 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 FOXB2Q5VYV0 432 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 TMEM268Q5VZI3 342 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 ZNF425Q6IV72 752 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 TMEM88Q6PEY1 159 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 PLXDC2Q6UX71 529 aa16.39■□□□□ 0.21
COL5A3-201ENST00000264828 EXOSC2Q13868 293 aaKnown RBP16.38■□□□□ 0.21
COL5A3-201ENST00000264828 USP51Q70EK9 711 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 SLC38A9Q8NBW4 561 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 RXFP4Q8TDU9 374 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 FER1L6-AS2Q96M78 137 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 GABARAPL3Q9BY60 117 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 ASB1Q9Y576 335 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 A3GALT2U3KPV4 340 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 IGHV3-15A0A0B4J1V0 119 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 LINC01553A4QN01 128 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 ZNF727A8MUV8 499 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 OR2J2O76002 312 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 APOBEC1P41238 236 aaKnown RBP16.38■□□□□ 0.21
COL5A3-201ENST00000264828 VPS25Q9BRG1 176 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 GABARAPL1Q9H0R8 117 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 SLC25A32Q9H2D1 315 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 EPHX3Q9H6B9 360 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 CHRNA9Q9UGM1 479 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 TAAR5O14804 337 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 JTBO76095 146 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 TPOP07202 933 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 SPNP16150 400 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 SDHAP31040 664 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 RRADP55042 308 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 LYSMD1Q96S90 227 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 OCEL1Q9H607 264 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 KIR2DS1A0A191URI9 304 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 KLRC4-KLRK1H3BQV0 150 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 RPL12P30050 165 aaKnown RBP16.38■□□□□ 0.21
COL5A3-201ENST00000264828 KIR2DS4P43632 304 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 KIR2DS1Q14954 304 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 RAB35Q15286 201 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 MLF2Q15773 248 aaPredicted RBP16.38■□□□□ 0.21
COL5A3-201ENST00000264828 OPALINQ96PE5 141 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 THAP10Q9P2Z0 257 aaPredicted RBP16.38■□□□□ 0.21
COL5A3-201ENST00000264828 TCRBV5S1A1TA0A578 114 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 WDR1O75083 606 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 SEMG1P04279 462 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 TRAPPC2P0DI81 140 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 TRAPPC2BP0DI82 140 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 DMRTC1Q5HYR2 192 aa16.38■□□□□ 0.21
COL5A3-201ENST00000264828 KHDC1LQ5JSQ8 128 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms