RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 C9orf170A2RU37 121 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 SERPINE2P07093 398 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 TLE4Q04727 773 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 IKZF1Q13422 519 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 RAB32Q13637 225 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 TOMM34Q15785 309 aaPredicted RBP13.68□□□□□ -0.22
CASC3-201ENST00000264645 ZXDCQ2QGD7 858 aaPredicted RBP13.68□□□□□ -0.22
CASC3-201ENST00000264645 EEF1A1P5Q5VTE0 462 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 FAM160A2Q8N612 972 aaPredicted RBP13.68□□□□□ -0.22
CASC3-201ENST00000264645 OR14L1PQ8NHC6 308 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 SCN3AQ9NY46 2000 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 CPED1A4D0V7 1026 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 A6NIZ1 184 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 PHF1O43189 567 aaPredicted RBP13.68□□□□□ -0.22
CASC3-201ENST00000264645 HBE1P02100 147 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 RAP1BP61224 184 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 TESK1Q15569 626 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 MED25Q71SY5 747 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 EXD3Q8N9H8 876 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 RBMXL1Q96E39 390 aaKnown RBP13.68□□□□□ -0.22
CASC3-201ENST00000264645 SGCZQ96LD1 299 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 POLMQ9NP87 494 aaPredicted RBP13.68□□□□□ -0.22
CASC3-201ENST00000264645 AK3Q9UIJ7 227 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 AMDHD2Q9Y303 409 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 CBY1Q9Y3M2 126 aa13.68□□□□□ -0.22
CASC3-201ENST00000264645 OGG1O15527 345 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 ST8SIA3O43173 380 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 MBTPS2O43462 519 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 RPL18Q07020 188 aaKnown RBP13.67□□□□□ -0.22
CASC3-201ENST00000264645 ZNF74Q16587 644 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 VWA2Q5GFL6 755 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 TFAP2EQ6VUC0 442 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 SLC39A11Q8N1S5 342 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 GVQW1Q8N7I0 195 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 ZFP62Q8NB50 900 aaPredicted RBP13.67□□□□□ -0.22
CASC3-201ENST00000264645 RSC1A1Q92681 617 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 EDAQ92838 391 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 TAAR8Q969N4 342 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 TGM7Q96PF1 710 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 RAB33BQ9H082 229 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 OR10A2Q9H208 303 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 A8MXK9 166 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 C5AR1P21730 350 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 CST5P28325 142 aaPredicted RBP13.67□□□□□ -0.22
CASC3-201ENST00000264645 EMDP50402 254 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 POLR2GP62487 172 aaKnown RBP eCLIP13.67□□□□□ -0.22
CASC3-201ENST00000264645 SSBP1Q04837 148 aaKnown RBP13.67□□□□□ -0.22
CASC3-201ENST00000264645 CHRDL2Q6WN34 429 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 CPNE4Q96A23 557 aaPredicted RBP13.67□□□□□ -0.22
CASC3-201ENST00000264645 STACQ99469 402 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 CABLES2Q9BTV7 478 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 ACAD8Q9UKU7 415 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 ZNF43P17038 809 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 SFTPDP35247 375 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 TSFMP43897 325 aaKnown RBP13.67□□□□□ -0.22
CASC3-201ENST00000264645 PRSS35Q8N3Z0 413 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 NECAP1Q8NC96 275 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 RCBTB1Q8NDN9 531 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 SGK3Q96BR1 496 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 ALG14Q96F25 216 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 PRRG4Q9BZD6 226 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 KLHL13Q9P2N7 655 aa13.67□□□□□ -0.22
CASC3-201ENST00000264645 DFFBO76075 338 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 ZNF728P0DKX0 622 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 ABOP16442 354 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 RAB5AP20339 215 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 DAP3P51398 398 aaKnown RBP13.66□□□□□ -0.22
CASC3-201ENST00000264645 MLC1Q15049 377 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 UEVLDQ8IX04 471 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 ZNF383Q8NA42 475 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 LRFN5Q96NI6 719 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 TIMM29Q9BSF4 260 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 PAPOLGQ9BWT3 736 aaKnown RBP13.66□□□□□ -0.22
CASC3-201ENST00000264645 RBM24Q9BX46 236 aaKnown RBP13.66□□□□□ -0.22
CASC3-201ENST00000264645 C1orf198Q9H425 327 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 FKRPQ9H9S5 495 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 PRR13Q9NZ81 148 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 NXT1Q9UKK6 140 aaKnown RBP13.66□□□□□ -0.22
CASC3-201ENST00000264645 TMED7Q9Y3B3 224 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 PPP5D1E7EU14 171 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 GATCO43716 136 aaKnown RBP13.66□□□□□ -0.22
CASC3-201ENST00000264645 ALOX12BO75342 701 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 ABLIM3O94929 683 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 HPNP05981 417 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 SLC17A1Q14916 467 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 OR51A4Q8NGJ6 313 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 OR5L1Q8NGL2 311 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 BORCS8Q96FH0 119 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 GNG13Q9P2W3 67 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 FCGR2AP12318 317 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 WDR38Q5JTN6 314 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 CST9LP1Q5W188 147 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 CMTM1Q8IZ96 169 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 RNF128Q8TEB7 428 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 RGP1Q92546 391 aaPredicted RBP13.66□□□□□ -0.22
CASC3-201ENST00000264645 POM121Q96HA1 1249 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 TMEM272A0A1B0GTI8 110 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 A0A1W2PPE2 198 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 TMEM127O75204 238 aa13.66□□□□□ -0.22
CASC3-201ENST00000264645 YIF1AO95070 293 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms