RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 HERPUD1Q15011 391 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 TOMM20Q15388 145 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 ACKR1Q16570 336 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 DND1Q8IYX4 353 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 CENPSQ8N2Z9 138 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC15A4Q8N697 577 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 CCDC54Q8NEL0 328 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 OR2M7Q8NG81 312 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 M1APQ8TC57 530 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 NAT6Q93015 286 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 LRR1Q96L50 414 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 GPN2Q9H9Y4 310 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 Q9N2J8 555 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC7A10Q9NS82 523 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 P2RX2Q9UBL9 471 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC22A13Q9Y226 551 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 RBMX2Q9Y388 322 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 METTL15A6NJ78 407 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF726A6NNF4 738 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 OR5F1O95221 314 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 PYCR1P32322 319 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 IFITM2Q01629 132 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 SNTB1Q13884 538 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 TIGD3Q6B0B8 471 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 LAMTOR1Q6IAA8 161 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF322Q6U7Q0 402 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 TCEANCQ8N8B7 351 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 TSPAN14Q8NG11 270 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 ASB5Q8WWX0 329 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 PRTFDC1Q9NRG1 225 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 GTF2A1LQ9UNN4 478 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 C2CD3Q4AC94 2353 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 A0A1B0GW64 132 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 NPIPB13A6NJU9 1138 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 KIAA1324LA8MWY0 1029 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 NPIPB4C9JG80 1138 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 TCN2P20062 427 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 HTR3AP46098 478 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 DIO1P49895 249 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF84P51523 738 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 PGGHGQ32M88 737 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 VASH1Q7L8A9 365 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 PLXDC1Q8IUK5 500 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 SKA3Q8IX90 412 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 PM20D2Q8IYS1 436 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 GTPBP8Q8N3Z3 284 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 NEUROG1Q92886 237 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 ATF6BQ99941 703 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 INIPQ9NRY2 104 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 NXT1Q9UKK6 140 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 RAXQ9Y2V3 346 aa4.85□□□□□ -1.63
TOPBP1-201ENST00000260810 RER1O15258 196 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 TNFSF15O95150 251 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 CLPTM1O96005 669 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 LMO1P25800 156 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 RBM34P42696 430 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF41P51814 821 aaPredicted RBP4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 RRADP55042 308 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 NR1H2P55055 460 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 PAX2Q02962 417 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 ST3GAL4Q11206 333 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 EIF5AL1Q6IS14 154 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 TOR1AIP2Q8NFQ8 470 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 SFXN2Q96NB2 322 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 ZPBPQ9BS86 351 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 GMPPBQ9Y5P6 360 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF879B4DU55 563 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 SLC33A1O00400 549 aaPredicted RBP4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 PRODHO43272 600 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 ACTC1P68032 377 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 ACTA1P68133 377 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 PLGLB1Q02325 96 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 GRM7Q14831 915 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 POU4F3Q15319 338 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 IFI44LQ53G44 452 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 WDR38Q5JTN6 314 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 TSPO2Q5TGU0 170 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 MEDAGQ5VYS4 303 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 SSX8Q7RTT4 187 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 PPP1R3BQ86XI6 285 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 KLBQ86Z14 1044 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 Q8TCH9 128 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 BCO1Q9HAY6 547 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 PLEKHA6Q9Y2H5 1048 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 RPL36Q9Y3U8 105 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 MMACHCQ9Y4U1 282 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 TRBV11-1A0A0K0K1C0 115 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 ZNF208O43345 1280 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 DHFRP00374 187 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 CGB3P0DN86 165 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 CGB7P0DN87 165 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 PVALBP20472 110 aaPredicted RBP4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 TEKQ02763 1124 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 THAP5Q7Z6K1 395 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 TMEM163Q8TC26 289 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 FNDC8Q8TC99 324 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 DAZLQ92904 295 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 SH3YL1Q96HL8 342 aaPredicted RBP4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 MCHR1Q99705 422 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms