RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PPP1R3DO95685 299 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 TXNDC12O95881 172 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 HLA-HP01893 362 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 KRT8P05787 483 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 OR8G3PP0DMU2 310 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 CBR1P16152 277 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 GSTM3P21266 225 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 S100A1P23297 94 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 NRN1LQ496H8 165 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 RPL13AP3Q6NVV1 102 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 ADAM5Q6NVV9 412 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 RASSF6Q6ZTQ3 369 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 SKA3Q8IX90 412 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 PIAS4Q8N2W9 510 aaPredicted RBP14.59□□□□□ -0.07
SDCBP-201ENST00000260130 LILRB1Q8NHL6 650 aaPredicted RBP14.59□□□□□ -0.07
SDCBP-201ENST00000260130 NSMAFQ92636 917 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 ERMAPQ96PL5 475 aaPredicted RBP14.59□□□□□ -0.07
SDCBP-201ENST00000260130 SLC38A2Q96QD8 506 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 IFT27Q9BW83 186 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 EGLN3Q9H6Z9 239 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 ERVK13-1Q9NX77 482 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 IL20Q9NYY1 176 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 DNAJC27Q9NZQ0 273 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 CDH10Q9Y6N8 788 aa14.59□□□□□ -0.07
SDCBP-201ENST00000260130 SLC22A23A1A5C7 686 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 PRSS37A4D1T9 235 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 H7C1C5 153 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 IMPA2O14732 288 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 ARPC3O15145 178 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 RGS5O15539 181 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 FARS2O95363 451 aaKnown RBP14.58□□□□□ -0.07
SDCBP-201ENST00000260130 IGKV3-15P01624 115 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 CD79AP11912 226 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 ARR3P36575 388 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 RPS19P39019 145 aaKnown RBP14.58□□□□□ -0.07
SDCBP-201ENST00000260130 LCN6P62502 163 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 OCLNQ16625 522 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 C3orf36Q3SXR2 165 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 RSBN1Q5VWQ0 802 aaPredicted RBP14.58□□□□□ -0.07
SDCBP-201ENST00000260130 PAMR1Q6UXH9 720 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 NANOGP1Q8N7R0 232 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 PROKR2Q8NFJ6 384 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 NANOS1Q8WY41 292 aaKnown RBP14.58□□□□□ -0.07
SDCBP-201ENST00000260130 AKAP1Q92667 903 aaKnown RBP eCLIP14.58□□□□□ -0.07
SDCBP-201ENST00000260130 ZNF486Q96H40 463 aaPredicted RBP14.58□□□□□ -0.07
SDCBP-201ENST00000260130 NDUFB11Q9NX14 153 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 SSR3Q9UNL2 185 aa14.58□□□□□ -0.07
SDCBP-201ENST00000260130 RBMX2Q9Y388 322 aaKnown RBP14.58□□□□□ -0.07
SDCBP-201ENST00000260130 IGHV1-18A0A0C4DH31 117 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 ZNF670-ZNF695F2Z2N8 137 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 SOX14O95416 240 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 MLLT11Q13015 90 aaPredicted RBP14.58□□□□□ -0.08
SDCBP-201ENST00000260130 GSG1Q2KHT4 349 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 SLC22A25Q6T423 547 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 TMPRSS11AQ6ZMR5 421 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 MDP1Q86V88 176 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 CELF2-AS1Q8N7Q2 184 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 WDFY2Q96P53 400 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 NEK6Q9HC98 313 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 C14orf119Q9NWQ9 140 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 ZNF224Q9NZL3 707 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 PLEKHA6Q9Y2H5 1048 aa14.58□□□□□ -0.08
SDCBP-201ENST00000260130 SHISA9B4DS77 424 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 HS3ST1O14792 307 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 MYL12BO14950 172 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 IGLV1-44P01699 117 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 NPR2P20594 1047 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 CRYBB2P43320 205 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 MRPS34P82930 218 aaKnown RBP14.57□□□□□ -0.08
SDCBP-201ENST00000260130 ZNF91Q05481 1191 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 COX10Q12887 443 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 ZNF672Q499Z4 452 aaPredicted RBP14.57□□□□□ -0.08
SDCBP-201ENST00000260130 CD300LDQ6UXZ3 194 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 OR52L1Q8NGH7 329 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 NEUROG1Q92886 237 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 NINJ1Q92982 152 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 TSSK6Q9BXA6 273 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 ZNF221Q9UK13 617 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 IDH3BO43837 385 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 UBL3O95164 117 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 RAF1P04049 648 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 DNASE1P24855 282 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 NOS3P29474 1203 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 CDAP32320 146 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 CDKN2AP42771 156 aaKnown RBP14.57□□□□□ -0.08
SDCBP-201ENST00000260130 GUCA1AP43080 201 aaPredicted RBP14.57□□□□□ -0.08
SDCBP-201ENST00000260130 RAB1AP62820 205 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 SPOCK1Q08629 439 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 CLEC12AQ5QGZ9 265 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 PLA2G12AQ9BZM1 189 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 VSX1Q9NZR4 365 aaPredicted RBP14.57□□□□□ -0.08
SDCBP-201ENST00000260130 CLEC2DQ9UHP7 191 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 TBC1D24Q9ULP9 559 aa14.57□□□□□ -0.08
SDCBP-201ENST00000260130 IQCMA0A1B0GVH7 501 aa14.56□□□□□ -0.08
SDCBP-201ENST00000260130 CECR9P0C854 216 aa14.56□□□□□ -0.08
SDCBP-201ENST00000260130 PATE4P0C8F1 98 aa14.56□□□□□ -0.08
SDCBP-201ENST00000260130 IDH3GP51553 393 aaPredicted RBP14.56□□□□□ -0.08
SDCBP-201ENST00000260130 DOC2BQ14184 412 aa14.56□□□□□ -0.08
SDCBP-201ENST00000260130 C20orf204Q6ZNR8 217 aa14.56□□□□□ -0.08
SDCBP-201ENST00000260130 SPATC1Q76KD6 591 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms