RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 CSNK1A1P48729 337 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 FOXG1P55316 489 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF121P58317 390 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-201ENST00000258607 TSPAN5P62079 268 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 LINC00303Q3SY05 128 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 PHYHD1Q5SRE7 291 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 FNDC7Q5VTL7 733 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 C3orf33Q6P1S2 294 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 MRGPREQ86SM8 312 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 SLITRK4Q8IW52 837 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 OR8H3Q8N146 312 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 ARMC10Q8N2F6 343 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 OR6F1Q8NGZ6 308 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 FNDC9Q8TBE3 224 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 ADAT3Q96EY9 351 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-201ENST00000258607 MAP6Q96JE9 813 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 SGCZQ96LD1 299 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 C4orf45Q96LM5 186 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 TINAGL1Q9GZM7 467 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-201ENST00000258607 DPAGT1Q9H3H5 408 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF319Q9P2F9 582 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 GDF2Q9UK05 429 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-201ENST00000258607 TCFL5Q9UL49 500 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 MGAT4AQ9UM21 535 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 SETD2Q9BYW2 2564 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-201ENST00000258607 A0A0J9YW62 118 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 PINLYPA6NC86 204 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 SPRY1O43609 319 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-201ENST00000258607 KLF7O75840 302 aaPredicted RBP8.09□□□□□ -1.11
CKAP2-201ENST00000258607 H2AFB2P0C5Z0 115 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 PGAM2P15259 253 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 SELEP16581 610 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 SIGLEC14Q08ET2 396 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 IL10RAQ13651 578 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 TMEM164Q5U3C3 297 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 ABHD17BQ5VST6 288 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 LYPD8Q6UX82 237 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 LINC00114Q6XXX2 140 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 Q6ZTK2 550 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 ZNF679Q8IYX0 411 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 PRR18Q8N4B5 295 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 OR4D6Q8NGJ1 314 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 POC1BQ8TC44 478 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 MCHR2Q969V1 340 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 SLC25A38Q96DW6 304 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 MRPL48Q96GC5 212 aaKnown RBP8.09□□□□□ -1.11
CKAP2-201ENST00000258607 MSANTD3Q96H12 275 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 GPHA2Q96T91 129 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 MGAT4CQ9UBM8 478 aa8.09□□□□□ -1.11
CKAP2-201ENST00000258607 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.09□□□□□ -1.113e-6■■■■■ 38.2
CKAP2-201ENST00000258607 DOCK11Q5JSL3 2073 aa8.09□□□□□ -1.12
CKAP2-201ENST00000258607 POU3F2P20265 443 aaPredicted RBP8.08□□□□□ -1.12
CKAP2-201ENST00000258607 MAGEA5P43359 124 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 TAS2R20P59543 309 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 DCAF7P61962 342 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 RAB11BQ15907 218 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 PLPPR5Q32ZL2 321 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ACER2Q5QJU3 275 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 FAM180AQ6UWF9 173 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 LRRTM1Q86UE6 522 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ANGPTL5Q86XS5 388 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 CMIPQ8IY22 773 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 DTWD2Q8NBA8 298 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 OR52N5Q8NH56 324 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 NEK7Q8TDX7 302 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 YIPF5Q969M3 257 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ST6GAL2Q96JF0 529 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 SIGLEC12Q96PQ1 595 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 S100A13Q99584 98 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 PDCD10Q9BUL8 212 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 TMPRSS13Q9BYE2 586 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ADAM19Q9H013 955 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ESRP2Q9H6T0 727 aaKnown RBP8.08□□□□□ -1.12
CKAP2-201ENST00000258607 GPR173Q9NS66 373 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 CYSLTR2Q9NS75 346 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF629Q9UEG4 869 aaPredicted RBP8.08□□□□□ -1.12
CKAP2-201ENST00000258607 EIF4E2O60573 245 aaKnown RBP8.08□□□□□ -1.12
CKAP2-201ENST00000258607 RBBP9O75884 186 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 IGHG1P01857 330 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 PCOLCEQ15113 449 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 FAM71CQ8NEG0 241 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 NFAM1Q8NET5 270 aaPredicted RBP8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF285Q96NJ3 590 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 DCBLD2Q96PD2 775 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 OR8B4Q96RC9 309 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 DDOQ99489 341 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 NXF2Q9GZY0 626 aaKnown RBP8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF581Q9P0T4 197 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 HHLA2Q9UM44 414 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 TLN2Q9Y4G6 2542 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 ANKRD33BA6NCL7 494 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 LIPT2A6NK58 231 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 J3QRE1 110 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 SIGLEC5O15389 551 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 NXPH3O95157 252 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 KNG1P01042 644 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 HLA-HP01893 362 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 PMP2P02689 132 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 OPRM1P35372 400 aa8.08□□□□□ -1.12
CKAP2-201ENST00000258607 CLDN15P56746 228 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms