RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 LPOP22079 712 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 DUSP1P28562 367 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 OR1D4P47884 311 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 GNG4P50150 75 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SIRPB2Q5JXA9 342 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 FAM78BQ5VT40 261 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF660Q6AZW8 331 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 CYS1Q717R9 158 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 CPOQ8IVL8 374 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 PQLC3Q8N755 202 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 NKAIN3Q8N8D7 197 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 ZDHHC22Q8N966 263 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 OR4D9Q8NGE8 314 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 GINS3Q9BRX5 216 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SNHG12Q9BXW3 62 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 BCO2Q9BYV7 579 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 GPR62Q9BZJ7 368 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 LPAR5Q9H1C0 372 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SFXN1Q9H9B4 322 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 RCC2Q9P258 522 aaKnown RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TBL2Q9Y4P3 447 aaKnown RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 MYH14Q7Z406 1995 aaKnown RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 GPR39O43194 453 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TFPI2P48307 235 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 ID2Q02363 134 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 MIDNQ504T8 468 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 CTSL3PQ5NE16 218 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 MRPL21Q7Z2W9 205 aaKnown RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 ERASQ7Z444 233 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SYNPRQ8TBG9 265 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SPRYD4Q8WW59 207 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 C5orf30Q96GV9 206 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SYNPO2LQ9H987 977 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 HRASLSQ9HDD0 168 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 ZNF107Q9UII5 783 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 HSPB8Q9UJY1 196 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 CYSLTR1Q9Y271 337 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 AMDHD2Q9Y303 409 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TRBC2A0A5B9 178 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 MAN2B1O00754 1011 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 FAM87AP0C7U9 286 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TRGC1P0CF51 173 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 IRF2P14316 349 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 HLA-GP17693 338 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 CXCL2P19875 107 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 AGAP20933 346 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 HLA-DRB3P79483 266 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 PLAURQ03405 335 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 DOC2BQ14184 412 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SIX1Q15475 284 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 C5orf47Q569G3 176 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TMPRSS12Q86WS5 348 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SDR9C7Q8NEX9 313 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 OR4K5Q8NGD3 323 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 OR4K13Q8NH42 304 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 ORAI1Q96D31 301 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 MMABQ96EY8 250 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC23A2Q9UGH3 650 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 AJAP1Q9UKB5 411 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 OSGIN2Q9Y236 505 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 MYH11P35749 1972 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 QSOX1O00391 747 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 CLDN5O00501 218 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SLC31A1O15431 190 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 PIPP12273 146 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 CCL23P55773 120 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 HERV-K104P61576 105 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 ELOBQ15370 118 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 OR6T1Q8NGN1 323 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 ACTR3CQ9C0K3 210 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 POFUT1Q9H488 388 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 GOLGA2P5Q9HBQ8 144 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 KLHL13Q9P2N7 655 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 PRODH2Q9UF12 536 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 DOCK2Q92608 1830 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TBC1D3DA0A087WVF3 549 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TBC1D3IA0A087WXS9 549 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TBC1D3EA0A087X179 549 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TBC1D3LB9A6J9 549 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SPINT1O43278 529 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 RCBTB2O95199 551 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 OR2T7P0C7T2 308 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 MPGP29372 298 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 OTX1P32242 354 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 MAS1LP35410 378 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 GPM6AP51674 278 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TBC1D3CQ6IPX1 549 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 IGDCC3Q8IVU1 814 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 TBC1D3Q8IZP1 549 aaPredicted RBP6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 OR51G2Q8NGK0 314 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 OR5W2Q8NH69 310 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 EDAQ92838 391 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 NIPSNAP1Q9BPW8 284 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SMOC2Q9H3U7 446 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 BCAS3Q9H6U6 928 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 SS18L2Q9UHA2 77 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 FOXJ3Q9UPW0 622 aa6.16□□□□□ -1.42
PDGFRA-201ENST00000257290 EMC8O43402 210 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms