RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ZNF275Q9NSD4 429 aaPredicted RBP19.55■□□□□ 0.72
LSM4-201ENST00000252816 CYB5R1Q9UHQ9 305 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 KLHL21Q9UJP4 597 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 BAIAP2Q9UQB8 552 aa19.55■□□□□ 0.72
LSM4-201ENST00000252816 MALRD1Q5VYJ5 2156 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 GNGT2O14610 69 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 SPRY3O43610 288 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 CDC14BO60729 498 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 IGHV1-46P01743 117 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 MT-ND5P03915 603 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 HOXB6P17509 224 aaKnown RBP19.54■□□□□ 0.72
LSM4-201ENST00000252816 CRMP1Q14194 572 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 SLC36A3Q495N2 470 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 LYPD4Q6UWN0 246 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 PAPD5Q8NDF8 572 aaKnown RBP19.54■□□□□ 0.72
LSM4-201ENST00000252816 PROKR2Q8NFJ6 384 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 OR9Q1Q8NGQ5 310 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 OR2T4Q8NH00 348 aa19.54■□□□□ 0.72
LSM4-201ENST00000252816 PDP1Q9P0J1 537 aaPredicted RBP19.54■□□□□ 0.72
LSM4-201ENST00000252816 TVP23AA6NH52 213 aa19.53■□□□□ 0.72
LSM4-201ENST00000252816 GPR6P46095 362 aaPredicted RBP19.53■□□□□ 0.72
LSM4-201ENST00000252816 CHN2P52757 468 aa19.53■□□□□ 0.72
LSM4-201ENST00000252816 CBX1P83916 185 aa19.53■□□□□ 0.72
LSM4-201ENST00000252816 KRTAP27-1Q3LI81 207 aa19.53■□□□□ 0.72
LSM4-201ENST00000252816 IQCF1Q8N6M8 205 aa19.53■□□□□ 0.72
LSM4-201ENST00000252816 CMBLQ96DG6 245 aa19.53■□□□□ 0.72
LSM4-201ENST00000252816 DCLRE1CQ96SD1 692 aaKnown RBP19.53■□□□□ 0.72
LSM4-201ENST00000252816 CDADC1Q9BWV3 514 aa19.53■□□□□ 0.72
LSM4-201ENST00000252816 NMNAT2Q9BZQ4 307 aa19.53■□□□□ 0.72
LSM4-201ENST00000252816 MSL2Q9HCI7 577 aa19.53■□□□□ 0.72
LSM4-201ENST00000252816 PNRC2Q9NPJ4 139 aaKnown RBP19.53■□□□□ 0.72
LSM4-201ENST00000252816 PLSCR5A0PG75 271 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 TIMM8AO60220 97 aaPredicted RBP19.52■□□□□ 0.72
LSM4-201ENST00000252816 GYPBP06028 91 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 PSKH1P11801 424 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 TUBG1P23258 451 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 RPS27P42677 84 aaKnown RBP19.52■□□□□ 0.72
LSM4-201ENST00000252816 TMEM33P57088 247 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 FAM209AQ5JX71 171 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 USP51Q70EK9 711 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 HIPK1Q86Z02 1210 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 MAP6Q96JE9 813 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 PITX2Q99697 317 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 TUBG2Q9NRH3 451 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 CYSLTR2Q9NS75 346 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 DECR2Q9NUI1 292 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 PURGQ9UJV8 347 aaKnown RBP19.52■□□□□ 0.72
LSM4-201ENST00000252816 CACNG2Q9Y698 323 aa19.52■□□□□ 0.72
LSM4-201ENST00000252816 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.52■□□□□ 0.718e-7■■■■■ 27.2
LSM4-201ENST00000252816 LOC100289279A0A1B0GTE1 492 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 WNT9BO14905 357 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 TPD52L2O43399 206 aaKnown RBP19.51■□□□□ 0.71
LSM4-201ENST00000252816 PPIHO43447 177 aaKnown RBP19.51■□□□□ 0.71
LSM4-201ENST00000252816 E2F6O75461 281 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 ADH4P08319 380 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 CLUP10909 449 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 ZNF823P16415 610 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 KITLGP21583 273 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 PRKACGP22612 351 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 LIPAP38571 399 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 CRYBB2P43320 205 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 SLC25A1P53007 311 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 SPRNQ5BIV9 151 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 OR2AJ1Q8NGZ0 328 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 TEX47Q8TBZ9 253 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 HAVCR1Q96D42 359 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 YY1AP1Q9H869 796 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 SAP30LQ9HAJ7 183 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 NTN4Q9HB63 628 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 DNAJB9Q9UBS3 223 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 CGGBP1Q9UFW8 167 aaPredicted RBP19.51■□□□□ 0.71
LSM4-201ENST00000252816 KCNG2Q9UJ96 466 aa19.51■□□□□ 0.71
LSM4-201ENST00000252816 SVEP1Q4LDE5 3571 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 IGHV1-69-2A0A0G2JMI3 117 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 H3BN98 237 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 IFNGP01579 166 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 SPI1P17947 270 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 RGS6P49758 472 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 CCNIQ14094 377 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 HLXQ14774 488 aaPredicted RBP19.5■□□□□ 0.71
LSM4-201ENST00000252816 Q6ZR03 302 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 ZNF511Q8NB15 262 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 OR10S1Q8NGN2 331 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 HPS1Q92902 700 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 PTP4A1Q93096 173 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 APOBEC3DQ96AK3 386 aaPredicted RBP19.5■□□□□ 0.71
LSM4-201ENST00000252816 COG8Q96MW5 612 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 ATF6BQ99941 703 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 NARFLQ9H6Q4 476 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 WDR76Q9H967 626 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 CMC2Q9NRP2 79 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 PTTG3PQ9NZH4 202 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 COMMD3-BMI1R4GMX3 469 aa19.5■□□□□ 0.71
LSM4-201ENST00000252816 RIIAD1A6NNX1 92 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 F5H5K5 113 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 J3QW42 95 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 LMX1BO60663 402 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 ATP5HO75947 161 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 ACSM4P0C7M7 580 aa19.49■□□□□ 0.71
LSM4-201ENST00000252816 GRK5P34947 590 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms