RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 OR2M7Q8NG81 312 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 OR6N1Q8NGY5 312 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 OR2G2Q8NGZ5 317 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 PPP1R14BQ96C90 147 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 RBP7Q96R05 134 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 ELL3Q9HB65 397 aaPredicted RBP7.69□□□□□ -1.18
VPS4B-201ENST00000238497 ABCA4P78363 2273 aa7.69□□□□□ -1.18
VPS4B-201ENST00000238497 TMEM269A0A1B0GVZ9 245 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 PINLYPA6NC86 204 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 TMEM200CA6NKL6 621 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF726A6NNF4 738 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 J3QRE1 110 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 SULT2B1O00204 365 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 ORC5O43913 435 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 IGHV3-9P01782 118 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 H2BFMP0C1H6 154 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 MAGEA5P43359 124 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 SLC6A9P48067 706 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 SRYQ05066 204 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 SLC18B1Q6NT16 456 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 PLXDC2Q6UX71 529 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 DVL3Q92997 716 aaPredicted RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 SPACA9Q96E40 222 aaPredicted RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 TMEM43Q9BTV4 400 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 MED18Q9BUE0 208 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 PPP1R3EQ9H7J1 279 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 SERINC1Q9NRX5 453 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 CELSR2Q9HCU4 2923 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 NUP210LQ5VU65 1888 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 TRAV18A0A075B6X5 111 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 IGKV1D-43A0A0B4J1Z2 117 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 P2RY10O00398 339 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 TP53I11O14683 189 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 OR2T1O43869 369 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 EIF4E2O60573 245 aaKnown RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 NOS1APO75052 506 aaPredicted RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 PNPP00491 289 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 ZNF43P17038 809 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 RIDAP52758 137 aaKnown RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 PLA2G7Q13093 441 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 EFR3AQ14156 821 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 WDR38Q5JTN6 314 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 FAM122BQ7Z309 247 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 YRDCQ86U90 279 aaKnown RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 GLB1L2Q8IW92 636 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 UPRTQ96BW1 309 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 S100A16Q96FQ6 103 aaKnown RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 FAM173AQ9BQD7 235 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 TMEM246Q9BRR3 403 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 ABHD6Q9BV23 337 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 ATG5Q9H1Y0 275 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 MED28Q9H204 178 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 RBFOX1Q9NWB1 397 aaKnown RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 COQ3Q9NZJ6 369 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 RAMP1O60894 148 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 BGLAPP02818 100 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 GDF1P27539 372 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 CA7P43166 264 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 BLVRAP53004 296 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 MYBPHQ13203 477 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 CDONQ4KMG0 1287 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 C9orf135Q5VTT2 229 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 FAM205BPQ63HN1 556 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 STAC2Q6ZMT1 411 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 OR52I2Q8NH67 350 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 GPR148Q8TDV2 347 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 PCNPQ8WW12 178 aaKnown RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 FAM71F1Q96KD3 344 aaPredicted RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 RBM24Q9BX46 236 aaKnown RBP7.68□□□□□ -1.18
VPS4B-201ENST00000238497 TTTY12Q9BZ98 90 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 SLC19A3Q9BZV2 496 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 PTGES2Q9H7Z7 377 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 DHDHQ9UQ10 334 aa7.68□□□□□ -1.18
VPS4B-201ENST00000238497 F5H5K5 113 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 FADS1O60427 444 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 LMX1BO60663 402 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 SLC43A1O75387 559 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CLDN1O95832 211 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 PLATP00750 562 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 ALOX5APP20292 161 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 STARP49675 285 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 GPR50Q13585 617 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 SLC10A1Q14973 349 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 Q499Y3 187 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 FNDC7Q5VTL7 733 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 GPR139Q6DWJ6 353 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 H1FNTQ75WM6 255 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-201ENST00000238497 TMEM251Q8N6I4 163 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 OR13C3Q8NGS6 347 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 NUBPLQ8TB37 319 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CHAC2Q8WUX2 184 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 ACOT12Q8WYK0 555 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 SLC7A6Q92536 515 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 DDIT4LQ96D03 193 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 SLC25A44Q96H78 314 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-201ENST00000238497 WDFY2Q96P53 400 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 ADAM19Q9H013 955 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 CYSLTR2Q9NS75 346 aa7.67□□□□□ -1.18
VPS4B-201ENST00000238497 VSX1Q9NZR4 365 aaPredicted RBP7.67□□□□□ -1.18
VPS4B-201ENST00000238497 KLHL9Q9P2J3 617 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms