RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 ANKRD60Q9BZ19 345 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 PIGMQ9H3S5 423 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 DDX31Q9H8H2 851 aaKnown RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 CGGBP1Q9UFW8 167 aaPredicted RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 FAM72CH0Y354 149 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 HSD17B6O14756 317 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 SDHAP31040 664 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 GNG3P63215 75 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 Q56UQ5 140 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 FAM72AQ5TYM5 149 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 FAM72DQ6L9T8 149 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 FAHD1Q6P587 224 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 FAM72BQ86X60 149 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 ARHGEF39Q8N4T4 335 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 LTBP4Q8N2S1 1624 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 TRIP12Q14669 1992 aaPredicted RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 RRASP10301 218 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 GPR19Q15760 415 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 SCD5Q86SK9 330 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 BAGE3Q86Y29 109 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 BAGE2Q86Y30 109 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 OR51I2Q9H344 312 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 RREB1Q92766 1687 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 URB1O60287 2271 aaKnown RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 ZNF195O14628 629 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 PPP3CBP16298 524 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 CRISP2P16562 243 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 UBE2KP61086 200 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 CDK5Q00535 292 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 DUSP8Q13202 625 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 RBPMS2Q6ZRY4 209 aaKnown RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 CBLL1Q75N03 491 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 DOLPP1Q86YN1 238 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 OR51F2Q8NH61 342 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 RASD2Q96D21 266 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 STRAPQ9Y3F4 350 aaKnown RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 ATP6V1G2-DDX39BF2Z307 99 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 ETV4P43268 484 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 ENDOGQ14249 297 aaKnown RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 TMEM104Q8NE00 496 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 OR13J1Q8NGT2 312 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 DUS3LQ96G46 650 aaKnown RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 COQ10AQ96MF6 247 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 PAAF1Q9BRP4 392 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 IGSF5Q9NSI5 407 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 FBXO34Q9NWN3 711 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 SMAD6O43541 496 aaKnown RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 ARRB2P32121 409 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 FAM189BP81408 668 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 PNLIPRP3Q17RR3 467 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 SOWAHCQ53LP3 525 aaPredicted RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 DGAT2L7PQ6IED9 249 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 PRR7Q8TB68 274 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 NSUN5Q96P11 429 aaKnown RBP6.77□□□□□ -1.33
MED28-201ENST00000237380 TREX1Q9NSU2 369 aa6.77□□□□□ -1.33
MED28-201ENST00000237380 PPP1R2P9O14990 202 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 F13BP05160 661 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 QDPRP09417 244 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 PRKACGP22612 351 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 HBA1P69905 142 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 TAGLNQ01995 201 aaKnown RBP6.76□□□□□ -1.33
MED28-201ENST00000237380 ABHD17CQ6PCB6 329 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 TUSC5Q8IXB3 177 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 OR13C9Q8NGT0 318 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 CNIH3Q8TBE1 160 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 OPALINQ96PE5 141 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 MARCH4Q9P2E8 410 aaPredicted RBP6.76□□□□□ -1.33
MED28-201ENST00000237380 SLCO1B1Q9Y6L6 691 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 NHSL1Q5SYE7 1610 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 IL5P05113 134 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 COX5AP20674 150 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 PRDX4Q13162 271 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 CNIH2Q6PI25 160 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 DCXRQ7Z4W1 244 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 CALHM3Q86XJ0 350 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 WDR31Q8NA23 367 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 ST8SIA4Q92187 359 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 OR6C68A6NDL8 312 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 MEOX1P50221 254 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 RNF4P78317 190 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 MAT1AQ00266 395 aaKnown RBP6.76□□□□□ -1.33
MED28-201ENST00000237380 RNF212Q495C1 297 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 SLC38A6Q8IZM9 456 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 UBAC2Q8NBM4 344 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 BPIFCQ8NFQ6 507 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 UBALD1Q8TB05 177 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 SPSB1Q96BD6 273 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 SPACA9Q96E40 222 aaPredicted RBP6.76□□□□□ -1.33
MED28-201ENST00000237380 PERPQ96FX8 193 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 INPP5KQ9BT40 448 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 SERTM1A2A2V5 107 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 PTNP21246 168 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 LCN10Q6JVE6 187 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 YRDCQ86U90 279 aaKnown RBP6.76□□□□□ -1.33
MED28-201ENST00000237380 SHISA5Q8N114 240 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 PIMREGQ9BSJ6 248 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 C1QTNF3Q9BXJ4 246 aa6.76□□□□□ -1.33
MED28-201ENST00000237380 ACKR4Q9NPB9 350 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms