RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 COL26A1Q96A83 441 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 ZMYND19Q96E35 227 aaPredicted RBP11.72□□□□□ -0.53
MSH2-201ENST00000233146 PRRT1Q99946 306 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 PCED1AQ9H1Q7 454 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 SLCO5A1Q9H2Y9 848 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 SLC13A4Q9UKG4 626 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 DENND4CQ5VZ89 1909 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 A0A087WV48 116 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 A0A0G2JN53 185 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 IGLV3-27P01718 113 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 DANCRP0C864 163 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 MAKP20794 623 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 IDH3GP51553 393 aaPredicted RBP11.72□□□□□ -0.53
MSH2-201ENST00000233146 IQCJQ1A5X6 159 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 Q499Y3 187 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 HIKESHIQ53FT3 197 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 RPUSD3Q6P087 351 aaKnown RBP11.72□□□□□ -0.53
MSH2-201ENST00000233146 DLK2Q6UY11 383 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 SLC35E3Q7Z769 313 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 KREMEN2Q8NCW0 462 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 HLA-CQ95604 372 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 ANKRD9Q96BM1 317 aaPredicted RBP11.72□□□□□ -0.53
MSH2-201ENST00000233146 C5orf34Q96MH7 638 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 SMDT1Q9H4I9 107 aa11.72□□□□□ -0.53
MSH2-201ENST00000233146 JTBO76095 146 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 CD160O95971 181 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 GALNSP34059 522 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 AADACL3Q5VUY0 350 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 WDR88Q6ZMY6 472 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 SLC35F2Q8IXU6 374 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 OR1P1Q8NH06 330 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 MRGPRDQ8TDS7 321 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 ZG16BQ96DA0 208 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 MCHR1Q99705 422 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 CAPN10Q9HC96 672 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 SERINC1Q9NRX5 453 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 LANCL2Q9NS86 450 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 CDV3Q9UKY7 258 aaKnown RBP11.71□□□□□ -0.53
MSH2-201ENST00000233146 A0A087WV62 115 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 NKX6-3A6NJ46 265 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 H3BNC9 293 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 PCCBP05166 539 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 ARRB1P49407 418 aaPredicted RBP11.71□□□□□ -0.53
MSH2-201ENST00000233146 UBE2KP61086 200 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 ZNF616Q08AN1 781 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 EIF2B1Q14232 305 aaKnown RBP11.71□□□□□ -0.53
MSH2-201ENST00000233146 CCSMST1Q4G0I0 132 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 COA6Q5JTJ3 125 aaKnown RBP11.71□□□□□ -0.53
MSH2-201ENST00000233146 Q6ZVU0 165 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 SSX7Q7RTT5 188 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 C16orf70Q9BSU1 422 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 DPEP2Q9H4A9 486 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 MSL2Q9HCI7 577 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 SLC17A5Q9NRA2 495 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 WSB2Q9NYS7 404 aaPredicted RBP11.71□□□□□ -0.53
MSH2-201ENST00000233146 C5AR2Q9P296 337 aa11.71□□□□□ -0.53
MSH2-201ENST00000233146 NUP210Q8TEM1 1887 aaPredicted RBP11.71□□□□□ -0.54
MSH2-201ENST00000233146 TRAV8-7A0A075B6U6 113 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 TLCD2A6NGC4 264 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 F5H5T6 163 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 K7EPK0 472 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 RCBTB2O95199 551 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 MAS1P04201 325 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 CSN2P05814 226 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 ZNF888P0CJ79 500 aaPredicted RBP11.71□□□□□ -0.54
MSH2-201ENST00000233146 F3P13726 295 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 FOSL2P15408 326 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 CFPP27918 469 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 SELENOTP62341 195 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 DLK1P80370 383 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 FAM71E2Q8N5Q1 922 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 LMNTD1Q8N9Z9 388 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 TMEM104Q8NE00 496 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 OR51F2Q8NH61 342 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 MFSD8Q8NHS3 518 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 LGR4Q9BXB1 951 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 VAX2Q9UIW0 290 aa11.71□□□□□ -0.54
MSH2-201ENST00000233146 IGLV3-16A0A075B6K0 115 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 DOK2O60496 412 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 CDC40O60508 579 aaKnown RBP eCLIP11.7□□□□□ -0.54
MSH2-201ENST00000233146 IMPA1P29218 277 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 NAA10P41227 235 aaPredicted RBP11.7□□□□□ -0.54
MSH2-201ENST00000233146 KHKP50053 298 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 ARHGAP19Q14CB8 494 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 AGERQ15109 404 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 SZRD1Q7Z422 152 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 OIT3Q8WWZ8 545 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 DNASE2BQ8WZ79 361 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 ELP3Q9H9T3 547 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 MARCH2Q9P0N8 246 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 LHX3Q9UBR4 397 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 FOXD3Q9UJU5 478 aaPredicted RBP11.7□□□□□ -0.54
MSH2-201ENST00000233146 TCFL5Q9UL49 500 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 SLC7A7Q9UM01 511 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 BRCA2P51587 3418 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 A0A0U1RQV5 110 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 ELOA3DA6NLF2 546 aaPredicted RBP11.7□□□□□ -0.54
MSH2-201ENST00000233146 LEFTY2O00292 366 aa11.7□□□□□ -0.54
MSH2-201ENST00000233146 LILRB3O75022 631 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms