RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 C11orf87Q6NUJ2 197 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 C3orf33Q6P1S2 294 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 KCNRGQ8N5I3 272 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 CMBLQ96DG6 245 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 VRK1Q99986 396 aaPredicted RBP15.45■□□□□ 0.06
USB1-201ENST00000219281 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.45■□□□□ 0.06
USB1-201ENST00000219281 COMMD9Q9P000 198 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 GDF2Q9UK05 429 aaPredicted RBP15.45■□□□□ 0.06
USB1-201ENST00000219281 TNFSF18Q9UNG2 199 aa15.45■□□□□ 0.06
USB1-201ENST00000219281 A0A0A6YYH2 397 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 TMEM269A0A1B0GVZ9 245 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 KANTRA0A1W2PQU2 76 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 WIPF3A6NGB9 483 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 LILRA5A6NI73 299 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 A6NJ64 397 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 TOR1AO14656 332 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 STARP49675 285 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 SLC26A5P58743 744 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 CXADRP78310 365 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 NSDHLQ15738 373 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 C1orf100Q5SVJ3 147 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 FJX1Q86VR8 437 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 PCDH15Q96QU1 1955 aa15.44■□□□□ 0.06
USB1-201ENST00000219281 GRINAQ7Z429 371 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 TRAPPC6BQ86SZ2 158 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 GVQW1Q8N7I0 195 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 AQP3Q92482 292 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 FBXW5Q969U6 566 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 ZNF75AQ96N20 296 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 AIFM2Q9BRQ8 373 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 ZNF107Q9UII5 783 aaPredicted RBP15.43■□□□□ 0.06
USB1-201ENST00000219281 PLEKHA6Q9Y2H5 1048 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 THADAQ6YHU6 1953 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 A0A1B0GW55 424 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 LOC390937A0A1W2PQ73 354 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 OR14I1A6ND48 311 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 EIF1AYO14602 144 aaKnown RBP15.43■□□□□ 0.06
USB1-201ENST00000219281 TO15178 435 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 ISG15P05161 165 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 DUX4L2P0CJ85 424 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 DUX4L3P0CJ86 424 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 DUX4L4P0CJ87 422 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 DUX4L5P0CJ88 424 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 DUX4L6P0CJ89 424 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 DUX4L7P0CJ90 424 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 SLC25A4P12235 298 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 SRSF4Q08170 494 aaKnown RBP15.43■□□□□ 0.06
USB1-201ENST00000219281 SLC22A6Q4U2R8 563 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 RNASE10Q5GAN6 216 aaKnown RBP15.43■□□□□ 0.06
USB1-201ENST00000219281 ELP2Q6IA86 826 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 LPCAT3Q6P1A2 487 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 SLC29A4Q7RTT9 530 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 C17orf82Q86X59 251 aaPredicted RBP15.43■□□□□ 0.06
USB1-201ENST00000219281 WDFY1Q8IWB7 410 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 CHST4Q8NCG5 386 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 ZNF248Q8NDW4 579 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 SLC26A10Q8NG04 563 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 PPP1R1CQ8WVI7 109 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 CNTD2Q9H8S5 307 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 CENPMQ9NSP4 180 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 TAS2R3Q9NYW6 316 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 DUX4Q9UBX2 424 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 RHBDD3Q9Y3P4 386 aa15.43■□□□□ 0.06
USB1-201ENST00000219281 FAM25EA8MYX2 175 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 BCL2L11O43521 198 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 NUDT21O43809 227 aaKnown RBP15.42■□□□□ 0.06
USB1-201ENST00000219281 OR2F2O95006 317 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 ZBTB25P24278 435 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 PNLIPRP2P54317 469 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 ATP1B3P54709 279 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 PPP1R1AQ13522 171 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 OR2F1Q13607 317 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 MEF2DQ14814 521 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 ZNF260Q3ZCT1 412 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 OR52W1Q6IF63 320 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 ZNF704Q6ZNC4 412 aaPredicted RBP15.42■□□□□ 0.06
USB1-201ENST00000219281 SLC25A42Q86VD7 318 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 GKN2Q86XP6 184 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 LYPD6Q86Y78 171 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 ST7LQ8TDW4 575 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 DAZLQ92904 295 aaKnown RBP15.42■□□□□ 0.06
USB1-201ENST00000219281 FGGYQ96C11 551 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 NPAS1Q99742 590 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 PRRT1Q99946 306 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 ZNF471Q9BX82 626 aaPredicted RBP15.42■□□□□ 0.06
USB1-201ENST00000219281 CST11Q9H112 138 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 UCK1Q9HA47 277 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 BARX1Q9HBU1 254 aaPredicted RBP15.42■□□□□ 0.06
USB1-201ENST00000219281 COPS7AQ9UBW8 275 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 PCNX3Q9H6A9 2034 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 IGKV1D-43A0A0B4J1Z2 117 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 RNF222A6NCQ9 220 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 C2orf72A6NCS6 295 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 METTL21EPA6NDL7 271 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 TMEM200CA6NKL6 621 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 MS4A18H0YCH9 400 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 FADS1O60427 444 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 DLSTP36957 453 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 CAPZA1P52907 286 aa15.42■□□□□ 0.06
USB1-201ENST00000219281 ZNF345Q14585 488 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms