RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 LGALS8O00214 317 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 HS3ST1O14792 307 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 ZIC2O95409 532 aaPredicted RBP12.34□□□□□ -0.43
SF3A1-201ENST00000215793 CXCL10P02778 98 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 NDUFB7P17568 137 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF468Q5VIY5 522 aaPredicted RBP12.34□□□□□ -0.43
SF3A1-201ENST00000215793 LSRQ86X29 649 aaPredicted RBP12.34□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF573Q86YE8 665 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 ZNF2Q9BSG1 426 aaPredicted RBP12.34□□□□□ -0.43
SF3A1-201ENST00000215793 GPR84Q9NQS5 396 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 ZFP92A6NM28 416 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 SH2D1BO14796 132 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 ICOSLGO75144 302 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 HEXAP06865 529 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 SRFP11831 508 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 EVX1P49640 407 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 BTG2P78543 158 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 SHBQ15464 509 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 ACOT7LQ6ZUV0 252 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 ATF6BQ99941 703 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 RNF167Q9H6Y7 350 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 CRLF2Q9HC73 371 aa12.34□□□□□ -0.43
SF3A1-201ENST00000215793 A0A1W2PNR3 127 aa12.33□□□□□ -0.43
SF3A1-201ENST00000215793 CCSO14618 274 aa12.33□□□□□ -0.43
SF3A1-201ENST00000215793 PRRG2O14669 202 aa12.33□□□□□ -0.43
SF3A1-201ENST00000215793 B4GALT3O60512 393 aa12.33□□□□□ -0.43
SF3A1-201ENST00000215793 GLB1P16278 677 aa12.33□□□□□ -0.43
SF3A1-201ENST00000215793 TSLPQ969D9 159 aa12.33□□□□□ -0.43
SF3A1-201ENST00000215793 FGF20Q9NP95 211 aaPredicted RBP12.33□□□□□ -0.43
SF3A1-201ENST00000215793 TBX21Q9UL17 535 aa12.33□□□□□ -0.43
SF3A1-201ENST00000215793 CNIH1O95406 144 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 IL2RAP01589 272 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 H3F3CQ6NXT2 135 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 CORO2AQ92828 525 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 SIGLEC11Q96RL6 698 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 R4GMQ9 66 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 CORO6Q6QEF8 472 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 OR52N5Q8NH56 324 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 TTC9Q92623 222 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 SLC35E1Q96K37 410 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 RGPD5Q99666 1765 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 A0A087WZY1 265 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 NRASP01111 189 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 CRYAAP02489 173 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 CEACAM5P06731 702 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 PSMB6P28072 239 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 RAB13P51153 203 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 SUMO3P55854 103 aaPredicted RBP12.33□□□□□ -0.44
SF3A1-201ENST00000215793 SH2D5Q6ZV89 423 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 HIST2H3AQ71DI3 136 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 TEX101Q9BY14 249 aa12.33□□□□□ -0.44
SF3A1-201ENST00000215793 UBE2ZQ9H832 354 aaPredicted RBP12.33□□□□□ -0.44
SF3A1-201ENST00000215793 FRG2CA6NGY1 282 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 MGST1P10620 155 aaKnown RBP12.32□□□□□ -0.44
SF3A1-201ENST00000215793 ARRB2P32121 409 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 UBE2G2P60604 165 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 PPP2CBP62714 309 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 PPP2CAP67775 309 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 SLC17A1Q14916 467 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 LAIR1Q6GTX8 287 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 RNF150Q9ULK6 438 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 HDGFL3Q9Y3E1 203 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 CSAG2Q9Y5P2 127 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 USP51Q70EK9 711 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 OR5AS1Q8N127 324 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 FYTTD1Q96QD9 318 aaKnown RBP12.32□□□□□ -0.44
SF3A1-201ENST00000215793 NUDT9Q9BW91 350 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 ETHE1O95571 254 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 OR10J4P0C629 311 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 IGFBP6P24592 240 aaPredicted RBP12.32□□□□□ -0.44
SF3A1-201ENST00000215793 CCL4L1Q8NHW4 92 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 CNRIP1Q96F85 164 aaPredicted RBP12.32□□□□□ -0.44
SF3A1-201ENST00000215793 MED18Q9BUE0 208 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 ADAM10O14672 748 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 WDR1O75083 606 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 CLEC3BP05452 202 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 FOSL1P15407 271 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 FABP5Q01469 135 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 SMAD4Q13485 552 aaKnown RBP12.32□□□□□ -0.44
SF3A1-201ENST00000215793 TDHQ8IZJ6 230 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 TNFRSF12AQ9NP84 129 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 DLL4Q9NR61 685 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 CACNA1CQ13936 2221 aa12.32□□□□□ -0.44
SF3A1-201ENST00000215793 SNRPGP15A8MWD9 76 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 TRAF3IP2O43734 574 aaPredicted RBP12.31□□□□□ -0.44
SF3A1-201ENST00000215793 TSPAN12O95859 305 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 ITGBL1O95965 494 aaPredicted RBP12.31□□□□□ -0.44
SF3A1-201ENST00000215793 TIGD3Q6B0B8 471 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 PLEKHA2Q9HB19 425 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 FBXL4Q9UKA2 621 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 ZNF724A8MTY0 619 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 GABRB1P18505 474 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 C2orf76Q3KRA6 126 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 CXCL13O43927 109 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 HOXD11P31277 338 aaPredicted RBP12.31□□□□□ -0.44
SF3A1-201ENST00000215793 FLI1Q01543 452 aaPredicted RBP12.31□□□□□ -0.44
SF3A1-201ENST00000215793 CMTM4Q8IZR5 234 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 C8orf44Q96CB5 159 aa12.31□□□□□ -0.44
SF3A1-201ENST00000215793 MED29Q9NX70 200 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms