RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gm13178B1AVU7 408 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr288E9Q1P2 318 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Rps18P62270 152 aaKnown RBP14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Adam9Q61072 845 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr1115Q7TR53 326 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 SynbQ8BI41 618 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr826Q8VFU6 313 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr825Q8VFU7 320 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Supt7lQ9CZV5 412 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Cacna1hO88427 2365 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Obox6G3X9U1 347 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 CbfbQ08024 187 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Isg20l2Q3U1G5 368 aaKnown RBP14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Fbxo7Q3U7U3 523 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Plpp5Q3UMZ3 260 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Pgap1Q3UUQ7 922 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Prtn3Q61096 254 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr1135Q7TR42 310 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Q80Y39 304 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Rnf122Q8BP31 155 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr732Q8VFT5 308 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Lnx2Q91XL2 687 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Abhd3Q91ZH7 411 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Hoga1Q9DCU9 321 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Fbxo15Q9QZN0 433 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Ch25hQ9Z0F5 298 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Kcnj16Q9Z307 419 aa14.26□□□□□ -0.13
Trim39-203ENSMUST00000113706 Mfsd4b5E9PYY6 479 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Gm20715E9Q3L7 95 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 VtnP29788 478 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Pcyt1aP49586 367 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Col9a1Q05722 921 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Mettl21eQ8CDZ2 244 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr536Q8VFE9 307 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr1163Q8VFR4 316 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Plpp7Q91WB2 271 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Eef1e1Q9D1M4 174 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 MeiobQ9D513 470 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 4930447A16RikQ9D5F6 132 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Mbd3l1Q9D9H3 186 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Adam11Q9R1V4 773 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Abhd16aQ9Z1Q2 558 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 FancmQ8BGE5 2021 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Dpy19l1A6X919 746 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr115B2RTB9 312 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Calhm1D3Z291 348 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Gm17026K7N6Z0 213 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Slc30a2Q2HJ10 371 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Gm136Q3V037 328 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Elavl2Q60899 360 aaKnown RBP14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Il10rbQ61190 349 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Mrps23Q8VE22 177 aaKnown RBP14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Asb15Q8VHS6 583 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Vmn1r43Q8VIC9 329 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Sectm1aQ921W8 192 aa14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Dock7Q8R1A4 2130 aaKnown RBP14.25□□□□□ -0.13
Trim39-203ENSMUST00000113706 Gpr155A2AWR3 868 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Wdfy1E9Q4P1 410 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Gosr2O35166 212 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Avpr2O88721 371 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Doc2bP70169 412 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Fv1P70213 459 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr1321Q7TQW4 319 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr429Q7TRW1 312 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Elfn1Q8C8T7 828 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Krtcap3Q8K177 240 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr1497Q8VG11 314 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr1233Q8VGN0 305 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Plpp6Q9D4F2 292 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Gm21812J3QN84 227 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Brd7O88665 651 aaKnown RBP14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 CtseP70269 397 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 G6pd2P97324 513 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Mex3dQ3UE17 643 aaKnown RBP14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Ptpmt1Q66GT5 193 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Olfr885Q7TRE0 309 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Nsun3Q8CCT7 348 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Rnf128Q9D304 428 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Lyzl6Q9DA11 148 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Avpr1bQ9WU02 421 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Myo15bI7HPW8 3033 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Vmn2r113E9PZA6 856 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Vmn1r152E9Q9N3 307 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Vmn1r104L7N293 307 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 P06321 130 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Srsf6Q3TWW8 339 aaKnown RBP14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 HeltQ7TS99 240 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Mogat2Q80W94 334 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Slc30a6Q8BJM5 460 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Plekhn1Q8C886 359 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Msantd3Q9CR78 275 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Dcun1d5Q9CXV9 237 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Hcfc1r1Q9CYQ5 120 aa14.24□□□□□ -0.13
Trim39-203ENSMUST00000113706 Igkv4-63A0A0G2JFU6 117 aa14.23□□□□□ -0.13
Trim39-203ENSMUST00000113706 E030025P04RikA2A6V5 185 aa14.23□□□□□ -0.13
Trim39-203ENSMUST00000113706 S100a11P50543 98 aaKnown RBP14.23□□□□□ -0.13
Trim39-203ENSMUST00000113706 Ccr1l1P51676 356 aa14.23□□□□□ -0.13
Trim39-203ENSMUST00000113706 Acp5Q05117 327 aa14.23□□□□□ -0.13
Trim39-203ENSMUST00000113706 Gm525Q3V3I5 90 aa14.23□□□□□ -0.13
Trim39-203ENSMUST00000113706 Slc22a14Q497L9 629 aa14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 108.5 ms