RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 RNF133Q8WVZ7 376 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 SLAMF6Q96DU3 332 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 MRPL48Q96GC5 212 aaKnown RBP10.72□□□□□ -0.69
LINC00339-213ENST00000642137 NR1H4Q96RI1 486 aaPredicted RBP10.72□□□□□ -0.69
LINC00339-213ENST00000642137 COQ7Q99807 217 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF649Q9BS31 505 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 MED18Q9BUE0 208 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 HDHD2Q9H0R4 259 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 NOX3Q9HBY0 568 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 PNRC2Q9NPJ4 139 aaKnown RBP10.72□□□□□ -0.69
LINC00339-213ENST00000642137 ATPIF1Q9UII2 106 aa10.72□□□□□ -0.69
LINC00339-213ENST00000642137 EXOSC1Q9Y3B2 195 aaKnown RBP10.72□□□□□ -0.69
LINC00339-213ENST00000642137 OR6C6A6NF89 314 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 C19orf84I3L1E1 186 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 DOK2O60496 412 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF254O75437 659 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 EPXP11678 715 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF14P17017 642 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-213ENST00000642137 IGFBP2P18065 325 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 CHN2P52757 468 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 GABARAPL2P60520 117 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 ROM1Q03395 351 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF85Q03923 595 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 GALEQ14376 348 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF774Q6NX45 483 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 TMEM154Q6P9G4 183 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF322Q6U7Q0 402 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-213ENST00000642137 PLEKHG7Q6ZR37 379 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 VASH1Q7L8A9 365 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-213ENST00000642137 LHFPL3Q86UP9 236 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF584Q8IVC4 421 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 DMRTC2Q8IXT2 367 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-213ENST00000642137 ZNF679Q8IYX0 411 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 CPEB3Q8NE35 698 aaKnown RBP10.71□□□□□ -0.69
LINC00339-213ENST00000642137 OR10S1Q8NGN2 331 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 OR1J2Q8NGS2 313 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 OR1F12Q8NHA8 337 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 OR8B4Q96RC9 309 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 AMELYQ99218 206 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 TBX5Q99593 518 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 ATF6BQ99941 703 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 RHNO1Q9BSD3 238 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 C1QTNF6Q9BXI9 259 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 MROQ9BYG7 248 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 SLC24A3Q9HC58 644 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 CENPMQ9NSP4 180 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 DDX28Q9NUL7 540 aaKnown RBP10.71□□□□□ -0.69
LINC00339-213ENST00000642137 PAK1IP1Q9NWT1 392 aaPredicted RBP10.71□□□□□ -0.69
LINC00339-213ENST00000642137 CHCHD3Q9NX63 227 aaKnown RBP10.71□□□□□ -0.69
LINC00339-213ENST00000642137 ERVK13-1Q9NX77 482 aa10.71□□□□□ -0.69
LINC00339-213ENST00000642137 TRIM64A6NGJ6 449 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 ZNF878C9JN71 531 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 CASKO14936 926 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 RGS10O43665 173 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 SULT1C4O75897 302 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 H2BFMP0C1H6 154 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 LIMS3P0CW19 117 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 LIMS4P0CW20 117 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 MYL12AP19105 171 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 CRYGSP22914 178 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 PTAFRP25105 342 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 STOMP27105 288 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 C21orf33P30042 268 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-213ENST00000642137 DCTDP32321 178 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 APLNRP35414 380 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 OPRL1P41146 370 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 KIR2DL3P43628 341 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 GRB2P62993 217 aaKnown RBP10.7□□□□□ -0.7
LINC00339-213ENST00000642137 MVKQ03426 396 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 SNTB1Q13884 538 aaKnown RBP10.7□□□□□ -0.7
LINC00339-213ENST00000642137 TAF13Q15543 124 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 RSPO1Q2MKA7 263 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-213ENST00000642137 KCTD21Q4G0X4 260 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 ZNF684Q5T5D7 378 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 SEZ6L2Q6UXD5 910 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 SSX6Q7RTT6 188 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 PRSS48Q7RTY5 328 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 KRT77Q7Z794 578 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 WFDC8Q8IUA0 241 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 FAM222BQ8WU58 562 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 SNX33Q8WV41 574 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 ZC3HAV1LQ96H79 300 aaKnown RBP10.7□□□□□ -0.7
LINC00339-213ENST00000642137 POM121L2Q96KW2 1035 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 SIGLEC11Q96RL6 698 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 DCLRE1CQ96SD1 692 aaKnown RBP10.7□□□□□ -0.7
LINC00339-213ENST00000642137 KCNJ15Q99712 375 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 SPOCK3Q9BQ16 436 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 CDCA4Q9BXL8 241 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 NIPAL2Q9H841 368 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 SLCO1C1Q9NYB5 712 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 NPAP1Q9NZP6 1156 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 ERVK-18Q9QC07 812 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 KLHDC2Q9Y2U9 406 aa10.7□□□□□ -0.7
LINC00339-213ENST00000642137 CAB39Q9Y376 341 aaPredicted RBP10.7□□□□□ -0.7
LINC00339-213ENST00000642137 HEATR1Q9H583 2144 aaKnown RBP10.7□□□□□ -0.7
LINC00339-213ENST00000642137 IGHV1-18A0A0C4DH31 117 aa10.69□□□□□ -0.7
LINC00339-213ENST00000642137 METTL15A6NJ78 407 aa10.69□□□□□ -0.7
LINC00339-213ENST00000642137 PRSS44E7EML9 344 aa10.69□□□□□ -0.7
LINC00339-213ENST00000642137 TNFAIP8O95379 198 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms