RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 ACTR6Q9GZN1 396 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 PTGES2Q9H7Z7 377 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 ZNF160Q9HCG1 818 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 LHFPL6Q9Y693 200 aa15.09■□□□□ 0.01
PHGDH-229ENST00000641891 PHF3Q92576 2039 aaKnown RBP15.08■□□□□ 0.01
PHGDH-229ENST00000641891 TTLL8A6PVC2 850 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 ZNF780AO75290 641 aaPredicted RBP15.08■□□□□ 0.01
PHGDH-229ENST00000641891 IGHG1P01857 330 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 ACSM4P0C7M7 580 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 SULT1A3P0DMM9 295 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 SULT1A4P0DMN0 295 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 ANXA3P12429 323 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 HTR2CP28335 458 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 RAD52P43351 418 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 THEM4Q5T1C6 240 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 TCEAL6Q6IPX3 200 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 C9orf62Q8N4C0 152 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 ADPRHL1Q8NDY3 354 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 OR4D10Q8NGI6 311 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 TCEAL3Q969E4 200 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 SEC22CQ9BRL7 303 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 PROK2Q9HC23 129 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 DIABLOQ9NR28 239 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 ZNF275Q9NSD4 429 aaPredicted RBP15.08■□□□□ 0.01
PHGDH-229ENST00000641891 SLC39A1Q9NY26 324 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 STMN3Q9NZ72 180 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 PCDHGA5Q9Y5G8 931 aa15.08■□□□□ 0.01
PHGDH-229ENST00000641891 H7C417 338 aa15.08■□□□□ 0
PHGDH-229ENST00000641891 TTRP02766 147 aa15.08■□□□□ 0
PHGDH-229ENST00000641891 EXT1Q16394 746 aa15.08■□□□□ 0
PHGDH-229ENST00000641891 SLC25A25Q6KCM7 469 aa15.08■□□□□ 0
PHGDH-229ENST00000641891 DEGS2Q6QHC5 323 aa15.08■□□□□ 0
PHGDH-229ENST00000641891 ZNF704Q6ZNC4 412 aaPredicted RBP15.08■□□□□ 0
PHGDH-229ENST00000641891 JAGN1Q8N5M9 183 aa15.08■□□□□ 0
PHGDH-229ENST00000641891 OR11H4Q8NGC9 324 aa15.08■□□□□ 0
PHGDH-229ENST00000641891 C15orf40Q8WUR7 153 aa15.08■□□□□ 0
PHGDH-229ENST00000641891 JSRP1Q96MG2 331 aaPredicted RBP15.08■□□□□ 0
PHGDH-229ENST00000641891 TRAF4Q9BUZ4 470 aaPredicted RBP15.08■□□□□ 0
PHGDH-229ENST00000641891 NOX3Q9HBY0 568 aa15.08■□□□□ 0
PHGDH-229ENST00000641891 MTFP1Q9UDX5 166 aa15.08■□□□□ 0
PHGDH-229ENST00000641891 GDF2Q9UK05 429 aaPredicted RBP15.08■□□□□ 0
PHGDH-229ENST00000641891 SULT2B1O00204 365 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 RBBP9O75884 186 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 ANXA7P20073 488 aaKnown RBP15.07■□□□□ 0
PHGDH-229ENST00000641891 ANOS1P23352 680 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 MMP16P51512 607 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 CLPPQ16740 277 aaPredicted RBP15.07■□□□□ 0
PHGDH-229ENST00000641891 OR10K2Q6IF99 312 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 SLC23A3Q6PIS1 610 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 FGD2Q7Z6J4 655 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 OR2Y1Q8NGV0 311 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 LILRB4Q8NHJ6 448 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 GRPEL2Q8TAA5 225 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 FGGYQ96C11 551 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 HYLS1Q96M11 299 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 OXGR1Q96P68 337 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 C1orf198Q9H425 327 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 POLR1DQ9Y2S0 133 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 UBCP0CG48 685 aaKnown RBP15.07■□□□□ 0
PHGDH-229ENST00000641891 ZNF43P17038 809 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 EIF1P41567 113 aaKnown RBP15.07■□□□□ 0
PHGDH-229ENST00000641891 RPS18P62269 152 aaKnown RBP15.07■□□□□ 0
PHGDH-229ENST00000641891 ZNF468Q5VIY5 522 aaPredicted RBP15.07■□□□□ 0
PHGDH-229ENST00000641891 TMEM244Q5VVB8 128 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 SLC25A47Q6Q0C1 308 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 OPN5Q6U736 354 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 PIAS4Q8N2W9 510 aaPredicted RBP15.07■□□□□ 0
PHGDH-229ENST00000641891 OR4C16Q8NGL9 310 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 PBOV1Q9GZY1 135 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 MGAT4AQ9UM21 535 aa15.07■□□□□ 0
PHGDH-229ENST00000641891 MEIKINA0A087WXM9 373 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 IGHV3-15A0A0B4J1V0 119 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 PMS2P1A4D2B8 440 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 AQP7P3A6NL99 342 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 SELENOPP49908 381 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 SSR4P51571 173 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 KLHL24Q6TFL4 600 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 OR4D6Q8NGJ1 314 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 OR6X1Q8NH79 312 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 M1APQ8TC57 530 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 SLC25A43Q8WUT9 341 aaPredicted RBP15.06■□□□□ 0
PHGDH-229ENST00000641891 ZBTB8AQ96BR9 441 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 GON7Q9BXV9 100 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 ING4Q9UNL4 249 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 HDGFL3Q9Y3E1 203 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 RHBDD3Q9Y3P4 386 aa15.06■□□□□ 0
PHGDH-229ENST00000641891 ARPC4-TTLL3A0A0A6YYG9 625 aa15.05■□□□□ 0
PHGDH-229ENST00000641891 NSG1A0A0A6YYJ2 146 aa15.05■□□□□ 0
PHGDH-229ENST00000641891 QDPRP09417 244 aa15.05■□□□□ 0
PHGDH-229ENST00000641891 ADH6P28332 368 aa15.05■□□□□ 0
PHGDH-229ENST00000641891 GPR85P60893 370 aa15.05■□□□□ 0
PHGDH-229ENST00000641891 SIGLEC14Q08ET2 396 aa15.05■□□□□ 0
PHGDH-229ENST00000641891 C6orf183Q5T699 404 aa15.05■□□□□ 0
PHGDH-229ENST00000641891 ZNF627Q7L945 461 aa15.05■□□□□ 0
PHGDH-229ENST00000641891 GTPBP8Q8N3Z3 284 aaPredicted RBP15.05■□□□□ 0
PHGDH-229ENST00000641891 OR6M1Q8NGM8 313 aa15.05■□□□□ 0
PHGDH-229ENST00000641891 ZNF431Q8TF32 576 aaPredicted RBP15.05■□□□□ 0
PHGDH-229ENST00000641891 DVL3Q92997 716 aaPredicted RBP15.05■□□□□ 0
PHGDH-229ENST00000641891 ADAT3Q96EY9 351 aaPredicted RBP15.05■□□□□ 0
PHGDH-229ENST00000641891 ANGPTL4Q9BY76 406 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms