RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 OR10H4Q8NGA5 316 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 LINC01560Q8TB33 94 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 SMAP2Q8WU79 429 aaPredicted RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 MYDGFQ969H8 173 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 TMEM80Q96HE8 168 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 MARCH7Q9H992 704 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 CCNB1IP1Q9NPC3 277 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 MRPS18AQ9NVS2 196 aaKnown RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 TAS2R16Q9NYV7 291 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 NDRG3Q9UGV2 375 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 EXOGQ9Y2C4 368 aaKnown RBP8.21□□□□□ -1.1
PHGDH-228ENST00000641847 POLR1DQ9Y2S0 133 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 ALPK2Q86TB3 2170 aa8.21□□□□□ -1.1
PHGDH-228ENST00000641847 FREM1Q5H8C1 2179 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 A0A096LPE4 126 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 A0A1W2PPZ6 126 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 C12orf71A8MTZ7 269 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 J3QRE1 110 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 MSTNO14793 375 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 RGS10O43665 173 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 RAD51DO75771 328 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 LYZL6O75951 148 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 FARS2O95363 451 aaKnown RBP8.2□□□□□ -1.1
PHGDH-228ENST00000641847 IGHA1P01876 353 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 CDK1P06493 297 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 LYNP07948 512 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 ADRA2AP08913 450 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 CDH15P55291 814 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 ST3GAL4Q11206 333 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 ENDOGQ14249 297 aaKnown RBP8.2□□□□□ -1.1
PHGDH-228ENST00000641847 KCNMB1Q16558 191 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 NRN1LQ496H8 165 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF474Q6S9Z5 364 aaPredicted RBP8.2□□□□□ -1.1
PHGDH-228ENST00000641847 BEND4Q6ZU67 534 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 LINC00346Q8IVM7 164 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 LRRC18Q8N456 261 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 SLC22A24Q8N4F4 322 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 RFLNBQ8N5W9 214 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 OR1K1Q8NGR3 316 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 TBX5Q99593 518 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 SH3GL3Q99963 347 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 TTTY10Q9BZA0 68 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 YIPF3Q9GZM5 350 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 CCDC90BQ9GZT6 254 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 DUSP21Q9H596 190 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF696Q9H7X3 374 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 SIAEQ9HAT2 523 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 FGF20Q9NP95 211 aaPredicted RBP8.2□□□□□ -1.1
PHGDH-228ENST00000641847 ERVK-18Q9QC07 812 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 ASH2LQ9UBL3 628 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 KCNG2Q9UJ96 466 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 DIMT1Q9UNQ2 313 aaKnown RBP8.2□□□□□ -1.1
PHGDH-228ENST00000641847 COPS3Q9UNS2 423 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 KLHDC2Q9Y2U9 406 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 PCDHGB1Q9Y5G3 927 aa8.2□□□□□ -1.1
PHGDH-228ENST00000641847 A0A1W2PQL4 384 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 CIB4A0PJX0 185 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 A8MXE2 369 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF670-ZNF695F2Z2N8 137 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF593O00488 134 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 PHF1O43189 567 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 MT-ND2P03891 347 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 RPSAP08865 295 aaKnown RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 HTR1AP08908 422 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 OR2T7P0C7T2 308 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 OR8G3PP0DMU2 310 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 MYL12AP19105 171 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 IL32P24001 234 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 DCKP27707 260 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 C21orf33P30042 268 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 HCCSP53701 268 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 LSM6P62312 80 aaKnown RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 TGFBR3Q03167 851 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 MVKQ03426 396 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 AQP6Q13520 282 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 EIF2B1Q14232 305 aaKnown RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 P2RY6Q15077 328 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 TSC22D1Q15714 1073 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 PCK2Q16822 640 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 CHRFAM7AQ494W8 412 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 HIKESHIQ53FT3 197 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 TEX30Q5JUR7 227 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 FAM27BQ5VT28 67 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 SLC18B1Q6NT16 456 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 ANKRD16Q6P6B7 361 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF773Q6PK81 442 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 CORO6Q6QEF8 472 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 C20orf204Q6ZNR8 217 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF627Q7L945 461 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 BHLHA15Q7RTS1 189 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 SLC16A14Q7RTX9 510 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 DPY19L4Q7Z388 723 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 ACBD7Q8N6N7 88 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF433Q8N7K0 673 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF454Q8N9F8 522 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 C1orf162Q8NEQ5 155 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-228ENST00000641847 OR2T27Q8NH04 317 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 OTOSQ8NHW6 89 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 MNTQ99583 582 aa8.19□□□□□ -1.1
PHGDH-228ENST00000641847 ZNF416Q9BWM5 594 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms