RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 MDP1Q86V88 176 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 TIGD4Q8IY51 512 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 KLHL36Q8N4N3 616 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 YIPF7Q8N8F6 280 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 OR4F15Q8NGB8 312 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 SLAMF6Q96DU3 332 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 ATF6BQ99941 703 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 OR2H1Q9GZK4 316 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 ESRP2Q9H6T0 727 aaKnown RBP11.33□□□□□ -0.6
PHGDH-218ENST00000641491 MARCH7Q9H992 704 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 MRPL22Q9NWU5 206 aaKnown RBP11.33□□□□□ -0.6
PHGDH-218ENST00000641491 CYB5R1Q9UHQ9 305 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 KLF2Q9Y5W3 355 aaPredicted RBP11.33□□□□□ -0.6
PHGDH-218ENST00000641491 DOCK7Q96N67 2140 aa11.33□□□□□ -0.6
PHGDH-218ENST00000641491 UTP20O75691 2785 aaKnown RBP11.33□□□□□ -0.6
PHGDH-218ENST00000641491 ARHGAP21Q5T5U3 1957 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 C2CD3Q4AC94 2353 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 PHF3Q92576 2039 aaKnown RBP11.32□□□□□ -0.6
PHGDH-218ENST00000641491 ZNF83P51522 516 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 IDH3GP51553 393 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-218ENST00000641491 TPTEP56180 551 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 EGR3Q06889 387 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 PABPC1L2AQ5JQF8 200 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 OTPQ5XKR4 325 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 CDC20BQ86Y33 519 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 ZNF283Q8N7M2 679 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 IL17RDQ8NFM7 739 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 OR52I1Q8NGK6 324 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 AKR7LQ8NHP1 331 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 HAVCR2Q8TDQ0 301 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 FBLIM1Q8WUP2 373 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 NR1H4Q96RI1 486 aaPredicted RBP11.32□□□□□ -0.6
PHGDH-218ENST00000641491 ALG8Q9BVK2 526 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 MND1Q9BWT6 205 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 TTTY10Q9BZA0 68 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 NIPAL2Q9H841 368 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 PSORS1C1Q9UIG5 152 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 GNG8Q9UK08 70 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 POU2F3Q9UKI9 436 aa11.32□□□□□ -0.6
PHGDH-218ENST00000641491 DIMT1Q9UNQ2 313 aaKnown RBP11.32□□□□□ -0.6
PHGDH-218ENST00000641491 EXOGQ9Y2C4 368 aaKnown RBP11.32□□□□□ -0.6
PHGDH-218ENST00000641491 VSTM5A8MXK1 200 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 RER1O15258 196 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 CRYAAP02489 173 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 MT-ND5P03915 603 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 PATE4P0C8F1 98 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 CBR1P16152 277 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 RPS27P42677 84 aaKnown RBP11.31□□□□□ -0.6
PHGDH-218ENST00000641491 GBX2P52951 348 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-218ENST00000641491 NR1H2P55055 460 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 DBPQ10586 325 aaPredicted RBP11.31□□□□□ -0.6
PHGDH-218ENST00000641491 MRPL28Q13084 256 aaKnown RBP11.31□□□□□ -0.6
PHGDH-218ENST00000641491 ENDOGQ14249 297 aaKnown RBP11.31□□□□□ -0.6
PHGDH-218ENST00000641491 RAB39AQ14964 217 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 TAB1Q15750 504 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 ZNF774Q6NX45 483 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 KCTD20Q7Z5Y7 419 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 SLC30A7Q8NEW0 376 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 OR1F12Q8NHA8 337 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 ZNRF4Q8WWF5 429 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 GGHQ92820 318 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 FBXO17Q96EF6 278 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 RADILQ96JH8 1075 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 DACH2Q96NX9 599 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 COQ7Q99807 217 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 ABHD6Q9BV23 337 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 C1QTNF6Q9BXI9 259 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 ATPIF1Q9UII2 106 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 LHFPL6Q9Y693 200 aa11.31□□□□□ -0.6
PHGDH-218ENST00000641491 POLEQ07864 2286 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 A0A1W2PQL4 384 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-218ENST00000641491 C5orf49A4QMS7 147 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 METTL15A6NJ78 407 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 F5H5K5 113 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 J3QLW9 94 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 MRPS14O60783 128 aaKnown RBP11.3□□□□□ -0.6
PHGDH-218ENST00000641491 ZNF254O75437 659 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 ABHD16AO95870 558 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 CDK1P06493 297 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 ANXA2P07355 339 aaKnown RBP11.3□□□□□ -0.6
PHGDH-218ENST00000641491 COX5BP10606 129 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 COX6B1P14854 86 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 ZNF19P17023 458 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 CRHBPP24387 322 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 STOMP27105 288 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 PSG4Q00888 419 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 MALLQ13021 153 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 KCTD21Q4G0X4 260 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 MEX3BQ6ZN04 569 aaKnown RBP11.3□□□□□ -0.6
PHGDH-218ENST00000641491 LHFPL3Q86UP9 236 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 COMMD2Q86X83 199 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 ZNF679Q8IYX0 411 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 PIAS4Q8N2W9 510 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-218ENST00000641491 LINC01560Q8TB33 94 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 BOD1Q96IK1 185 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 COG8Q96MW5 612 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 DCLRE1CQ96SD1 692 aaKnown RBP11.3□□□□□ -0.6
PHGDH-218ENST00000641491 ELOVL3Q9HB03 270 aa11.3□□□□□ -0.6
PHGDH-218ENST00000641491 FGF20Q9NP95 211 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-218ENST00000641491 MRPS18AQ9NVS2 196 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms