RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 RENP00797 406 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 ADH4P08319 380 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 KCNMB1Q16558 191 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 MTX3Q5HYI7 312 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 LEG1Q6P5S2 330 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 TIMD4Q96H15 378 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 CCT8L2Q96SF2 557 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 IFT27Q9BW83 186 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 ACTR3BQ9P1U1 418 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 ATPIF1Q9UII2 106 aa21.44■■□□□ 1.02
VEGFA-232ENST00000640653 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.43■■□□□ 1.022e-8■■■□□ 14.7
VEGFA-232ENST00000640653 OR6C6A6NF89 314 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 B2RBV5 119 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 GAAP10253 952 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 NOS3P29474 1203 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 GSSP48637 474 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 MVKQ03426 396 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 TSPAN31Q12999 210 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 PSG7Q13046 419 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 OTPQ5XKR4 325 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 C1orf94Q6P1W5 598 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 CYP2R1Q6VVX0 501 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 ARHGAP24Q8N264 748 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 FITM2Q8N6M3 262 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 OR1F12Q8NHA8 337 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 SAMD8Q96LT4 415 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 TSSK2Q96PF2 358 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 KLHL21Q9UJP4 597 aa21.43■■□□□ 1.02
VEGFA-232ENST00000640653 IDH3BO43837 385 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 MSMBP08118 114 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 HIST1H1CP16403 213 aaKnown RBP21.42■■□□□ 1.02
VEGFA-232ENST00000640653 SRP14P37108 136 aaKnown RBP21.42■■□□□ 1.02
VEGFA-232ENST00000640653 LMO4P61968 165 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 CCDC92Q53HC0 331 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-232ENST00000640653 AVPI1Q5T686 147 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 LINC00471Q8N535 108 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 GJC3Q8NFK1 279 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 OR51F2Q8NH61 342 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 RAB1CQ92928 201 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 NSL1Q96IY1 281 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 DCLRE1CQ96SD1 692 aaKnown RBP21.42■■□□□ 1.02
VEGFA-232ENST00000640653 NMNAT3Q96T66 252 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 MUC13Q9H3R2 512 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 MSL2Q9HCI7 577 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 SRA1Q9HD15 236 aaKnown RBP21.42■■□□□ 1.02
VEGFA-232ENST00000640653 B9D1Q9UPM9 204 aa21.42■■□□□ 1.02
VEGFA-232ENST00000640653 IGLV1-36A0A0B4J1U3 117 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 FAM157AC9JC47 383 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 J3QW42 95 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 DCTN6O00399 190 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 RER1O15258 196 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 CD55P08174 381 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 ANPEPP15144 967 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 RGS6P49758 472 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 SLC3A1Q07837 685 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 PGBD2Q6P3X8 592 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 ZNF620Q6ZNG0 422 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.41■■□□□ 1.02
VEGFA-232ENST00000640653 OR4K13Q8NH42 304 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 SLC7A6Q92536 515 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 CCL17Q92583 94 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 TMEM186Q96B77 213 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 RAB39BQ96DA2 213 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 POFUT1Q9H488 388 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 ZNF665Q9H7R5 613 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 LPAR2Q9HBW0 351 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 HIF1ANQ9NWT6 349 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 PURGQ9UJV8 347 aaKnown RBP21.41■■□□□ 1.02
VEGFA-232ENST00000640653 STARD10Q9Y365 291 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 WIPI2Q9Y4P8 454 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 CACNG2Q9Y698 323 aa21.41■■□□□ 1.02
VEGFA-232ENST00000640653 TNFRSF11BO00300 401 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 GPANK1O95872 356 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 ATP6V1B2P21281 511 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 KITLGP21583 273 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 TNFSF4P23510 183 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 HMGA2P52926 109 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 MEP1BQ16820 701 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 RPL13AP3Q6NVV1 102 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 OR6V1Q8N148 313 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 COQ7Q99807 217 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 HDHD2Q9H0R4 259 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 RPRD1BQ9NQG5 326 aaKnown RBP21.4■■□□□ 1.02
VEGFA-232ENST00000640653 LYVE1Q9Y5Y7 322 aa21.4■■□□□ 1.02
VEGFA-232ENST00000640653 UBOX5O94941 541 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 FAM107AO95990 144 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 TNFAIP6P98066 277 aaPredicted RBP21.39■■□□□ 1.01
VEGFA-232ENST00000640653 CDK5R2Q13319 367 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 SLC36A3Q495N2 470 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 RINLQ6ZS11 566 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 PHC2Q8IXK0 858 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 CCDC197Q8NCU1 140 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 OR52L1Q8NGH7 329 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 OR5L1Q8NGL2 311 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 PTP4A1Q93096 173 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 CMBLQ96DG6 245 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 TRIM15Q9C019 465 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 LHFPL6Q9Y693 200 aa21.39■■□□□ 1.01
VEGFA-232ENST00000640653 CALB2P22676 271 aa21.38■■□□□ 1.01
VEGFA-232ENST00000640653 MAGEA2P43356 314 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms