RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 LIPHQ8WWY8 451 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 EDN3P14138 238 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 GUCA2AQ02747 115 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 TFF2Q03403 129 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 EBPQ15125 230 aaKnown RBP13.06□□□□□ -0.32
SCARB2-216ENST00000639300 SYT13Q7L8C5 426 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 OR1M1Q8NGA1 313 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 OR52N5Q8NH56 324 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 JAM3Q9BX67 310 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 TDRD15B5MCY1 1934 aaKnown RBP13.06□□□□□ -0.32
SCARB2-216ENST00000639300 FRG2CA6NGY1 282 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 ZNF254O75437 659 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 CHRM2P08172 466 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 PRKACBP22694 351 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 CYB561P49447 251 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 FOXK1P85037 733 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 OR9K2Q8NGE7 335 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 RPS10P5Q9NQ39 176 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 IGHV3-15A0A0B4J1V0 119 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 LILRA5A6NI73 299 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 MED6O75586 246 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 NME1P15531 152 aaKnown RBP13.06□□□□□ -0.32
SCARB2-216ENST00000639300 ABCD3P28288 659 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 FOXF1Q12946 379 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 HNF4GQ14541 408 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 PHLDA2Q53GA4 152 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 MAMSTRQ6ZN01 415 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 PGAP1Q75T13 922 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 MAML2Q8IZL2 1156 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-216ENST00000639300 GPBAR1Q8TDU6 330 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 SMIM4Q8WVI0 70 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 TAAR8Q969N4 342 aa13.06□□□□□ -0.32
SCARB2-216ENST00000639300 PCYT1BQ9Y5K3 369 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-216ENST00000639300 FAM166BA8MTA8 275 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 SPINT1O43278 529 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 CD63P08962 238 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 ALOX5APP20292 161 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 M6PRP20645 277 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 MVDP53602 400 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 SLC51BQ86UW2 128 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 ST8SIA1Q92185 356 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 DNAJB11Q9UBS4 358 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 HRKO00198 91 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 PIAS2O75928 621 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 NME2P22392 152 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 CDKN2AP42771 156 aaKnown RBP13.05□□□□□ -0.32
SCARB2-216ENST00000639300 RAB5BP61020 215 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 RPS27AP62979 156 aaKnown RBP13.05□□□□□ -0.32
SCARB2-216ENST00000639300 UBA52P62987 128 aaKnown RBP13.05□□□□□ -0.32
SCARB2-216ENST00000639300 RPL19P84098 196 aaKnown RBP13.05□□□□□ -0.32
SCARB2-216ENST00000639300 EGR3Q06889 387 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 DYRK1AQ13627 763 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 FJX1Q86VR8 437 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 OR52B4Q8NGK2 314 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 MOGAT1Q96PD6 335 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 OBP2BQ9NPH6 170 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.05□□□□□ -0.32
SCARB2-216ENST00000639300 GPR173Q9NS66 373 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 TRAPPC4Q9Y296 219 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 B3GALT5Q9Y2C3 310 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 TMEM221A6NGB7 291 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 CD300LBA8K4G0 201 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 ARPC3O15145 178 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 SGCEO43556 437 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 OGFOD3Q6PK18 319 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 SPEM1Q8N4L4 309 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 CCDC86Q9H6F5 360 aaKnown RBP13.05□□□□□ -0.32
SCARB2-216ENST00000639300 SCN10AQ9Y5Y9 1956 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 PLPP2O43688 288 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 FOLR1P15328 257 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 ABOP16442 354 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 GCH1P30793 250 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 KIR2DL1P43626 348 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-216ENST00000639300 FMODQ06828 376 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 FXNQ16595 210 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 ACTBL2Q562R1 376 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 OR10R2Q8NGX6 335 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 ABHD1Q96SE0 405 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 VN1R1Q9GZP7 353 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 S1PR5Q9H228 398 aa13.05□□□□□ -0.32
SCARB2-216ENST00000639300 IGHV3-64DA0A0J9YX35 117 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 MCRIP1C9JLW8 97 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 ALX3O95076 343 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 LAP3P28838 519 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 RFC3P40938 356 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 ZNF117Q03924 483 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 SMAD4Q13485 552 aaKnown RBP13.04□□□□□ -0.32
SCARB2-216ENST00000639300 LINC00303Q3SY05 128 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 ZNF285Q96NJ3 590 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 SULT4A1Q9BR01 284 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 ADGRL4Q9HBW9 690 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 LILRB5O75023 590 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 LALBAP00709 142 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 OPRM1P35372 400 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 IFITM3Q01628 133 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 KIAA1958Q8N8K9 716 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 IFI44Q8TCB0 444 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 GABRG3Q99928 467 aa13.04□□□□□ -0.32
SCARB2-216ENST00000639300 GCM2O75603 506 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms