RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 FJX1Q86VR8 437 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 CCDC36Q8IYA8 594 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 OR4D6Q8NGJ1 314 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 PNO1Q9NRX1 252 aaKnown RBP9.8□□□□□ -0.84
SNIP1-204ENST00000638725 EMC9Q9Y3B6 208 aa9.8□□□□□ -0.84
SNIP1-204ENST00000638725 KNL1Q8NG31 2342 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 KIF26BQ2KJY2 2108 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 LOC107986453A0A1B0GWG9 222 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 C9orf170A2RU37 121 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 CDC14CA4D256 554 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 TMEM200CA6NKL6 621 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 OR2AT4A6NND4 320 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 EEF1E1-BLOC1S5C9J1V9 151 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 CA3P07451 260 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 PRKXP51817 358 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 SLC37A1P57057 533 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 IL13RA1P78552 427 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 SHEQ5VZ18 495 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 KCTD18Q6PI47 426 aaPredicted RBP9.79□□□□□ -0.84
SNIP1-204ENST00000638725 KCTD9Q7L273 389 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 TRAPPC6BQ86SZ2 158 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 ZNF519Q8TB69 540 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 OR8D2Q9GZM6 311 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 NRSN2Q9GZP1 204 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 S1PR5Q9H228 398 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 TRAV36DV7A0A075B6V5 113 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 KIR2DS5A0A0G2JLQ3 304 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 A0A0G2JNG1 304 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 LOC101059948A0A1B0GTJ6 334 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 TMEM218A2RU14 115 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 KIR2DS3K7RE56 304 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 FADS1O60427 444 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 NSA2O95478 260 aaKnown RBP9.79□□□□□ -0.84
SNIP1-204ENST00000638725 VAMP1P23763 118 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 AKT2P31751 481 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 KIR2DS5Q14953 304 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 OR7A5Q15622 319 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 INPP5JQ15735 1006 aaPredicted RBP9.79□□□□□ -0.84
SNIP1-204ENST00000638725 RAB12Q6IQ22 244 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 LDLRAD3Q86YD5 345 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 THAP6Q8TBB0 222 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 PTPMT1Q8WUK0 201 aaPredicted RBP9.79□□□□□ -0.84
SNIP1-204ENST00000638725 NUDCD2Q8WVJ2 157 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 GAL3ST4Q96RP7 486 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 MAP3K3Q99759 626 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 LAT2Q9GZY6 243 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 HHLA2Q9UM44 414 aa9.79□□□□□ -0.84
SNIP1-204ENST00000638725 FREM3P0C091 2139 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 TDRD6O60522 2096 aaKnown RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 B4DGG1 531 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 PPICP45877 212 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 HSD17B7P56937 341 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 YPEL5P62699 121 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 MEF2DQ14814 521 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 SGCBQ16585 318 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 ZNF260Q3ZCT1 412 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 MAMDC2Q7Z304 686 aaPredicted RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 CBLN2Q8IUK8 224 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 ADAD2Q8NCV1 583 aaKnown RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 OR52N5Q8NH56 324 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 MITD1Q8WV92 249 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 AQP3Q92482 292 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 PRRT1Q99946 306 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 CYB5R1Q9UHQ9 305 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 GDF2Q9UK05 429 aaPredicted RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 COA3Q9Y2R0 106 aaPredicted RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 KLF2Q9Y5W3 355 aaPredicted RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 H7C2Y5 167 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 RAB27BO00194 218 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 SRSF10O75494 262 aaKnown RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 STK17BO94768 372 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 IL2RAP01589 272 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 CD37P11049 281 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 PGAM2P15259 253 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 MAOBP27338 520 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 RPL35P42766 123 aaKnown RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 AKR1D1P51857 326 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 HFEQ30201 348 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 CCDC157Q569K6 752 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 FAM109BQ6ICB4 259 aaPredicted RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 UQCC3Q6UW78 93 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 NUP54Q7Z3B4 507 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 RTN4RL2Q86UN3 420 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 INO80EQ8NBZ0 244 aaPredicted RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 CHST4Q8NCG5 386 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 OR5AP2Q8NGF4 316 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 FAM46BQ96A09 425 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 PHB2Q99623 299 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 FBRSQ9HAH7 460 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 SLC2A8Q9NY64 477 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 ZNF107Q9UII5 783 aaPredicted RBP9.78□□□□□ -0.84
SNIP1-204ENST00000638725 RHBDD3Q9Y3P4 386 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 R4GMQ9 66 aa9.78□□□□□ -0.84
SNIP1-204ENST00000638725 VCANP13611 3396 aa9.77□□□□□ -0.84
SNIP1-204ENST00000638725 A0A0A6YYH2 397 aa9.77□□□□□ -0.84
SNIP1-204ENST00000638725 CPED1A4D0V7 1026 aa9.77□□□□□ -0.84
SNIP1-204ENST00000638725 A6NJ64 397 aa9.77□□□□□ -0.84
SNIP1-204ENST00000638725 OR6C76A6NM76 312 aa9.77□□□□□ -0.84
SNIP1-204ENST00000638725 ACTL6AO96019 429 aa9.77□□□□□ -0.84
SNIP1-204ENST00000638725 ERCC1P07992 297 aaPredicted RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms