RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 TMIGD3P0DMS9 266 aaPredicted RBP10.33□□□□□ -0.76
CLN6-223ENST00000637823 B4GALT1P15291 398 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 CTSSP25774 331 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 FGF9P31371 208 aaPredicted RBP10.33□□□□□ -0.76
CLN6-223ENST00000637823 CEACAM8P31997 349 aaPredicted RBP10.33□□□□□ -0.76
CLN6-223ENST00000637823 GDI2P50395 445 aaKnown RBP10.33□□□□□ -0.76
CLN6-223ENST00000637823 VBP1P61758 197 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 LSM3P62310 102 aaKnown RBP10.33□□□□□ -0.76
CLN6-223ENST00000637823 RPS25P62851 125 aaKnown RBP10.33□□□□□ -0.76
CLN6-223ENST00000637823 GRB2P62993 217 aaKnown RBP10.33□□□□□ -0.76
CLN6-223ENST00000637823 SLC3A1Q07837 685 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 TAF13Q15543 124 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 PRR30Q53SZ7 412 aaPredicted RBP10.33□□□□□ -0.76
CLN6-223ENST00000637823 OR7E24Q6IFN5 339 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 ANKRD16Q6P6B7 361 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 KLHL24Q6TFL4 600 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 TFAP2EQ6VUC0 442 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 SLC16A14Q7RTX9 510 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 SKA3Q8IX90 412 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 CNEP1R1Q8N9A8 125 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 OR2G2Q8NGZ5 317 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 TMEM203Q969S6 136 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 TMED9Q9BVK6 235 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 EXOSC4Q9NPD3 245 aaKnown RBP10.33□□□□□ -0.76
CLN6-223ENST00000637823 PNRC2Q9NPJ4 139 aaKnown RBP10.33□□□□□ -0.76
CLN6-223ENST00000637823 FRRS1LQ9P0K9 344 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 GSTK1Q9Y2Q3 226 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 TIMM10BQ9Y5J6 103 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 R4GMQ9 66 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 SHANK1Q9Y566 2161 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 ZZEF1O43149 2961 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 RTTNQ86VV8 2226 aa10.33□□□□□ -0.76
CLN6-223ENST00000637823 CACNA1BQ00975 2339 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 SLC19A2O60779 497 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 SRSF10O75494 262 aaKnown RBP10.32□□□□□ -0.76
CLN6-223ENST00000637823 RGS9O75916 674 aaPredicted RBP10.32□□□□□ -0.76
CLN6-223ENST00000637823 TOXO94900 526 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 WNT11O96014 354 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 SERPINA3P01011 423 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 GLI4P10075 376 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 UGT2B10P36537 528 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 FOXG1P55316 489 aaPredicted RBP10.32□□□□□ -0.76
CLN6-223ENST00000637823 NANOS3P60323 173 aaKnown RBP10.32□□□□□ -0.76
CLN6-223ENST00000637823 TUBA1BP68363 451 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 FABP5Q01469 135 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 TGFBR3Q03167 851 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 SCRN3Q0VDG4 424 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 FOXF2Q12947 444 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 NFATC3Q12968 1075 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 ECH1Q13011 328 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 LY6DQ14210 128 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 SPCS2Q15005 226 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 ZNF829Q3KNS6 432 aaPredicted RBP10.32□□□□□ -0.76
CLN6-223ENST00000637823 CCDC92Q53HC0 331 aaPredicted RBP10.32□□□□□ -0.76
CLN6-223ENST00000637823 ELFN2Q5R3F8 820 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 Q6ZT83 130 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 USP43Q70EL4 1123 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 TUBA1AQ71U36 451 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 BTLAQ7Z6A9 289 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 DPPA2Q7Z7J5 298 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 CATSPERDQ86XM0 798 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 KBTBD8Q8NFY9 601 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 OR5AK2Q8NH90 309 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 ABHD4Q8TB40 342 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 STARD4Q96DR4 205 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 PGLYRP3Q96LB9 341 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 CENPOQ9BU64 300 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 HDHD5Q9BXW7 423 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 DDX28Q9NUL7 540 aaKnown RBP10.32□□□□□ -0.76
CLN6-223ENST00000637823 TXNL4BQ9NX01 149 aaKnown RBP10.32□□□□□ -0.76
CLN6-223ENST00000637823 PROCRQ9UNN8 238 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 ZNF281Q9Y2X9 895 aa10.32□□□□□ -0.76
CLN6-223ENST00000637823 TMEM269A0A1B0GVZ9 245 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 ACOD1A6NK06 481 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 TMEM212A6NML5 194 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 OR4C45A6NMZ5 311 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 GABRPO00591 440 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 LRRTM2O43300 516 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 SGCEO43556 437 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 TNFSF13O75888 250 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 PNPP00491 289 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 CGAP01215 116 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 APOC1P02654 83 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 ITGA5P08648 1049 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 CD8BP10966 210 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 HSD11B1P28845 292 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 ARR3P36575 388 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 MMP16P51512 607 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 NCS1P62166 190 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 RAB35Q15286 201 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 SLC36A2Q495M3 483 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 YIF1BQ5BJH7 314 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 C9orf135Q5VTT2 229 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 VWA1Q6PCB0 445 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 PAMR1Q6UXH9 720 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 UNQ9370/PRO34162Q6UXP9 181 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 TMEM91Q6ZNR0 172 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 PRSS35Q8N3Z0 413 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 OR1K1Q8NGR3 316 aa10.31□□□□□ -0.76
CLN6-223ENST00000637823 HSD17B8Q92506 261 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms