RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 MS4A2Q01362 244 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 CCNIQ14094 377 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 KCNMB1Q16558 191 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 CLEC12AQ5QGZ9 265 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 SLC35F1Q5T1Q4 408 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 ZNF620Q6ZNG0 422 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 OR6V1Q8N148 313 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 LINC01356Q8N9X3 169 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 NPEPL1Q8NDH3 523 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 OR52E2Q8NGJ4 325 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 OR1F12Q8NHA8 337 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 GTF3AQ92664 365 aaKnown RBP11.78□□□□□ -0.52
PNKP-228ENST00000637325 CCDC124Q96CT7 223 aaKnown RBP11.78□□□□□ -0.52
PNKP-228ENST00000637325 THTPAQ9BU02 230 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 CDADC1Q9BWV3 514 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 C1orf21Q9H246 121 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 NARFLQ9H6Q4 476 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 REEP1Q9H902 201 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 SAP30LQ9HAJ7 183 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 RPRD1BQ9NQG5 326 aaKnown RBP11.78□□□□□ -0.52
PNKP-228ENST00000637325 TBCCD1Q9NVR7 557 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 CDH10Q9Y6N8 788 aa11.78□□□□□ -0.52
PNKP-228ENST00000637325 ATRQ13535 2644 aa11.77□□□□□ -0.52
PNKP-228ENST00000637325 RER1O15258 196 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 ICMTO60725 284 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 HNF1AP20823 631 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 TUBG1P23258 451 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 IL2RGP31785 369 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 MAGEA2P43356 314 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.77□□□□□ -0.53
PNKP-228ENST00000637325 PPP1R8Q12972 351 aaKnown RBP11.77□□□□□ -0.53
PNKP-228ENST00000637325 MEP1BQ16820 701 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 SLC36A3Q495N2 470 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 CCDC92Q53HC0 331 aaPredicted RBP11.77□□□□□ -0.53
PNKP-228ENST00000637325 ZMAT1Q5H9K5 638 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 OR2T5Q6IEZ7 315 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 USP51Q70EK9 711 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 TRPM8Q7Z2W7 1104 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 SDR9C7Q8NEX9 313 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 GJC3Q8NFK1 279 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 OR2T29Q8NH02 315 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 BCAS4Q8TDM0 211 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 SLC7A6Q92536 515 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 ASB9Q96DX5 294 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 ELMOD3Q96FG2 381 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 CLPTM1LQ96KA5 538 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 COG8Q96MW5 612 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 EGLN1Q9GZT9 426 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 EGLN3Q9H6Z9 239 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 TUBG2Q9NRH3 451 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 TAS2R1Q9NYW7 299 aa11.77□□□□□ -0.53
PNKP-228ENST00000637325 CGGBP1Q9UFW8 167 aaPredicted RBP11.77□□□□□ -0.53
PNKP-228ENST00000637325 SAMHD1Q9Y3Z3 626 aaKnown RBP11.77□□□□□ -0.53
PNKP-228ENST00000637325 ARHGAP32A7KAX9 2087 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 IGLV1-36A0A0B4J1U3 117 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 IGHV1-69-2A0A0G2JMI3 117 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 OR6C68A6NDL8 312 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 OR6C6A6NF89 314 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 DCTN6O00399 190 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 GASTP01350 101 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 IGHV1-46P01743 117 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 FAM157CP0CG43 387 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 GAAP10253 952 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 IGFBP5P24593 272 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 CRYBB2P43320 205 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 MMP15P51511 669 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 TRAP1Q12931 704 aaKnown RBP11.76□□□□□ -0.53
PNKP-228ENST00000637325 HFEQ30201 348 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 FAM209AQ5JX71 171 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 CORO6Q6QEF8 472 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 RASSF6Q6ZTQ3 369 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 AQP11Q8NBQ7 271 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 OR5L1Q8NGL2 311 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 OR4C15Q8NGM1 316 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 OR2AJ1Q8NGZ0 328 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 DCLRE1CQ96SD1 692 aaKnown RBP11.76□□□□□ -0.53
PNKP-228ENST00000637325 DIRC2Q96SL1 478 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 BTBD10Q9BSF8 475 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 SOX7Q9BT81 388 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 RACGAP1Q9H0H5 632 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 FN3KQ9H479 309 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 TBC1D23Q9NUY8 699 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 STARD10Q9Y365 291 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 U3KQV3 271 aa11.76□□□□□ -0.53
PNKP-228ENST00000637325 GYG2O15488 501 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 RP2O75695 350 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 RAP2AP10114 183 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 ZNF823P16415 610 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 TNFSF4P23510 183 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 RGS6P49758 472 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 CDH15P55291 814 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 MVKQ03426 396 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 PSG7Q13046 419 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 MICAQ29983 383 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 DNAL1Q4LDG9 190 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 FAM120AOSQ5T036 256 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 ZBTB46Q86UZ6 589 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 LINC00346Q8IVM7 164 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 SLC26A10Q8NG04 563 aa11.75□□□□□ -0.53
PNKP-228ENST00000637325 CLDND2Q8NHS1 167 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms