RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ACPTQ9BZG2 426 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 TINAGL1Q9GZM7 467 aaPredicted RBP5.09□□□□□ -1.59
SCN1A-209ENST00000635750 NARFLQ9H6Q4 476 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 HRH3Q9Y5N1 445 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 DNAJC15Q9Y5T4 150 aa5.09□□□□□ -1.59
SCN1A-209ENST00000635750 A0A087WZY1 265 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 H7C1C5 153 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 AKR7A3O95154 331 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 ONECUT2O95948 504 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 CRISP2P16562 243 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 PSMB5P28074 263 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 GMPRP36959 345 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 PSMB2P49721 201 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 ARSDP51689 593 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 C21orf58P58505 322 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 SLC5A12Q1EHB4 618 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 AVPI1Q5T686 147 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 GLIPR1L1Q6UWM5 242 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 DHRS11Q6UWP2 260 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 OR4D10Q8NGI6 311 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 OR2A1Q8NGT9 310 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 RSRP1Q9BUV0 290 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 FBXL17Q9UF56 701 aa5.09□□□□□ -1.6
SCN1A-209ENST00000635750 FAM90A27PA6NNH2 459 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 BRS3P32247 399 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 AKR1C3P42330 323 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF141Q15928 474 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 PRR27Q6MZM9 219 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 OR10R2Q8NGX6 335 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 GNPNAT1Q96EK6 184 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 MISP3Q96FF7 219 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 INSM2Q96T92 566 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 C20orf24Q9BUV8 137 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 GORASP2Q9H8Y8 452 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 LYRM4Q9HD34 91 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 TEX50A0A1B0GTY4 177 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 FAM24AA6NFZ4 105 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 NRG2O14511 850 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 PMS2P2O95744 297 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 SULT1A3P0DMM9 295 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 SULT1A4P0DMN0 295 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 SDC1P18827 310 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 FAM189BP81408 668 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 HENMT1Q5T8I9 393 aaKnown RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 ENDOVQ8N8Q3 282 aaKnown RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF480Q8WV37 535 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 TTC9Q92623 222 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF486Q96H40 463 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 FAM103A1Q9BTL3 118 aaKnown RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 GPR173Q9NS66 373 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF724A8MTY0 619 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 SMAD6O43541 496 aaKnown RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 CD14P08571 375 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 SRMP19623 302 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 BLNKQ8WV28 456 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 DDOQ99489 341 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 MED20Q9H944 212 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 GPR55Q9Y2T6 319 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 SPRY3O43610 288 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 GATCO43716 136 aaKnown RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 TOX4O94842 621 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 QDPRP09417 244 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 SELENBP1Q13228 472 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 SIX1Q15475 284 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF260Q3ZCT1 412 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 LAIR1Q6GTX8 287 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 H3F3CQ6NXT2 135 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 KLHDC1Q8N7A1 406 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 PXT1Q8NFP0 134 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 PHYHIPQ92561 330 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 KIR3DX1Q9H7L2 352 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 RHOFQ9HBH0 211 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 CTSFQ9UBX1 484 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 AK3Q9UIJ7 227 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 MN1Q10571 1320 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 LINC01387J3KSC0 135 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 PPP1R2P9O14990 202 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 CACNG3O60359 315 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 PDGFBP01127 241 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 PLAURQ03405 335 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 IZUMO4Q1ZYL8 232 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 EMC4Q5J8M3 183 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 MORN1Q5T089 497 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 C17orf99Q6UX52 265 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 CARFQ8N187 725 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 ERGIC1Q969X5 290 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 FAM3DQ96BQ1 224 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 ZNF696Q9H7X3 374 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 IGSF5Q9NSI5 407 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 EBF1Q9UH73 591 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 MROH1Q8NDA8 1641 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 CCDC187A0A096LP49 1063 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 TXNDC12O95881 172 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 PTGER1P34995 402 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 RPL27P61353 136 aaKnown RBP5.08□□□□□ -1.6
SCN1A-209ENST00000635750 ILKQ13418 452 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 C15orf39Q6ZRI6 1047 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 TTC9BQ8N6N2 239 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 HSD17B11Q8NBQ5 300 aa5.08□□□□□ -1.6
SCN1A-209ENST00000635750 NPEPL1Q8NDH3 523 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms