RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 PCK2Q16822 640 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 TEX30Q5JUR7 227 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 ELFN2Q5R3F8 820 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 LINC01590Q5TEZ4 76 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 SLX4IPQ5VYV7 408 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 C12orf73Q69YU5 71 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 RGS7BPQ6MZT1 257 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 PLBD1Q6P4A8 553 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 OR51L1Q8NGJ5 315 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 OR1F12Q8NHA8 337 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 OTULINQ96BN8 352 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 C4orf45Q96LM5 186 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 DCLRE1CQ96SD1 692 aaKnown RBP12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 C9orf16Q9BUW7 83 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 MED20Q9H944 212 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 ELOVL3Q9HB03 270 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 BARX1Q9HBU1 254 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 HINT3Q9NQE9 182 aaKnown RBP12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 TVP23BQ9NYZ1 205 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 GDF2Q9UK05 429 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 ORC6Q9Y5N6 252 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 CELSR1Q9NYQ6 3014 aa12.7□□□□□ -0.38
CDC42BPB-209ENST00000634889 MYO9AB2RTY4 2548 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 CCDC168Q8NDH2 2452 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 TVP23AA6NH52 213 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 H3BSA7 217 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 J3QW42 95 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 ABHD16AO95870 558 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 LCKP06239 509 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 ZNF250P15622 560 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 TUBG1P23258 451 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 WNT5AP41221 380 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 ECH1Q13011 328 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 SLC35D3Q5M8T2 416 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 Q5PR19 223 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 CORO6Q6QEF8 472 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 CFAP77Q6ZQR2 320 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 CPOQ8IVL8 374 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 LINC00346Q8IVM7 164 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 ZNF101Q8IZC7 436 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 ZNF511Q8NB15 262 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 OR1J1Q8NGS3 322 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 ATF6BQ99941 703 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 WDR76Q9H967 626 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 MARCH7Q9H992 704 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 TUBG2Q9NRH3 451 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 TBCCD1Q9NVR7 557 aa12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 PRRC2AP48634 2157 aaKnown RBP12.69□□□□□ -0.38
CDC42BPB-209ENST00000634889 TMEM129A0AVI4 362 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 SLC2A5P22732 501 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 EPHA2P29317 976 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 GSTT1P30711 240 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 RGS6P49758 472 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 RAD23AP54725 363 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 SELENOVP59797 346 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 EFNB1P98172 346 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 LYPD4Q6UWN0 246 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 CXXC5Q7LFL8 322 aaKnown RBP12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 KRTAP1-3Q8IUG1 177 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 CBR4Q8N4T8 237 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 MAP6Q96JE9 813 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 COG8Q96MW5 612 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 INTS14Q96SY0 518 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 PITX2Q99697 317 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 DOK1Q99704 481 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 MRPL37Q9BZE1 423 aaKnown RBP12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 OR51V1Q9H2C8 321 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 OR51B6Q9H340 312 aa12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 PNRC2Q9NPJ4 139 aaKnown RBP12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 DDX28Q9NUL7 540 aaKnown RBP12.68□□□□□ -0.38
CDC42BPB-209ENST00000634889 CREBBPQ92793 2442 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 IGLV3-9A0A075B6K5 115 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 ZNF593O00488 134 aaPredicted RBP12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 PRKYO43930 277 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 BAG2O95816 211 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 IGHV4-39P01824 125 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 SPARCP09486 303 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 KLF3P57682 345 aaPredicted RBP12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 MSMPQ1L6U9 139 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 KRTAP27-1Q3LI81 207 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 KLHL12Q53G59 568 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 MBNL2Q5VZF2 373 aaKnown RBP12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 RFPL4BQ6ZWI9 263 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 DCXRQ7Z4W1 244 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 TIGD4Q8IY51 512 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 ABHD4Q8TB40 342 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 SYNPRQ8TBG9 265 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 EME1Q96AY2 570 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 MARS2Q96GW9 593 aaKnown RBP12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 RIBC2Q9H4K1 309 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 GPR160Q9UJ42 338 aa12.67□□□□□ -0.38
CDC42BPB-209ENST00000634889 M0R233 179 aa12.66□□□□□ -0.38
CDC42BPB-209ENST00000634889 ERCC1P07992 297 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPB-209ENST00000634889 PSKH1P11801 424 aa12.66□□□□□ -0.38
CDC42BPB-209ENST00000634889 GCH1P30793 250 aa12.66□□□□□ -0.38
CDC42BPB-209ENST00000634889 POLR2IP36954 125 aaKnown RBP12.66□□□□□ -0.38
CDC42BPB-209ENST00000634889 RPS27P42677 84 aaKnown RBP12.66□□□□□ -0.38
CDC42BPB-209ENST00000634889 ERVS71-1P61550 626 aa12.66□□□□□ -0.38
CDC42BPB-209ENST00000634889 PPP1CBP62140 327 aa12.66□□□□□ -0.38
CDC42BPB-209ENST00000634889 MOGQ16653 247 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms