RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 C10orf105Q8TEF2 133 aa14.36□□□□□ -0.11
UBE3D-208ENST00000626828 UTP4Q969X6 686 aaKnown RBP14.36□□□□□ -0.11
UBE3D-208ENST00000626828 MARS2Q96GW9 593 aaKnown RBP14.36□□□□□ -0.11
UBE3D-208ENST00000626828 DCLRE1CQ96SD1 692 aaKnown RBP14.36□□□□□ -0.11
UBE3D-208ENST00000626828 SMR3AQ99954 134 aa14.36□□□□□ -0.11
UBE3D-208ENST00000626828 FN3KQ9H479 309 aa14.36□□□□□ -0.11
UBE3D-208ENST00000626828 ATPIF1Q9UII2 106 aa14.36□□□□□ -0.11
UBE3D-208ENST00000626828 KCNG2Q9UJ96 466 aa14.36□□□□□ -0.11
UBE3D-208ENST00000626828 GRIP1Q9Y3R0 1128 aa14.36□□□□□ -0.11
UBE3D-208ENST00000626828 HIVEP2P31629 2446 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 IGHV4-30-2A0A087WSY4 118 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 LOC390937A0A1W2PQ73 354 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 OR6C6A6NF89 314 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 RIIAD1A6NNX1 92 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 NDUFS8O00217 210 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 LY6G6DO95868 133 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 ABHD16AO95870 558 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 NGFP01138 241 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 IGHV3-13P01766 116 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 HMGN1P05114 100 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 FASP25445 335 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 POU1F1P28069 291 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 GRK5P34947 590 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 ALDH3B1P43353 468 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 SLC25A1P53007 311 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 PPP1CBP62140 327 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 GINS1Q14691 196 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 NKPD1Q17RQ9 610 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 SLC27A4Q6P1M0 643 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 HS3ST5Q8IZT8 346 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 ATG16L2Q8NAA4 619 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 ZNF540Q8NDQ6 660 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 PROKR2Q8NFJ6 384 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 OR5K1Q8NHB7 308 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 ABHD4Q8TB40 342 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 SLC25A40Q8TBP6 338 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 UBASH3BQ8TF42 649 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 IPCEF1Q8WWN9 437 aaPredicted RBP14.35□□□□□ -0.11
UBE3D-208ENST00000626828 DNAJC9Q8WXX5 260 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 COG8Q96MW5 612 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 RBM4Q9BWF3 364 aaKnown RBP14.35□□□□□ -0.11
UBE3D-208ENST00000626828 CMC2Q9NRP2 79 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 MYEF2Q9P2K5 600 aaKnown RBP14.35□□□□□ -0.11
UBE3D-208ENST00000626828 LHFPL6Q9Y693 200 aa14.35□□□□□ -0.11
UBE3D-208ENST00000626828 YLPM1P49750 1951 aaKnown RBP14.34□□□□□ -0.11
UBE3D-208ENST00000626828 ZANQ9Y493 2812 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 H3BSA7 217 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 MT-ND5P03915 603 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 DAOP14920 347 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 FMO3P31513 532 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 PYCR1P32322 319 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 BLVRAP53004 296 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 ECH1Q13011 328 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 CCNIQ14094 377 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 CRMP1Q14194 572 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 ATP6AP1Q15904 470 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 ELFN2Q5R3F8 820 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 MBNL2Q5VZF2 373 aaKnown RBP14.34□□□□□ -0.11
UBE3D-208ENST00000626828 CORO6Q6QEF8 472 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 HIPK1Q86Z02 1210 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 ZNF786Q8N393 782 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 KLF14Q8TD94 323 aaPredicted RBP14.34□□□□□ -0.11
UBE3D-208ENST00000626828 SNX33Q8WV41 574 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 COQ7Q99807 217 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 TEX12Q9BXU0 123 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 NMNAT2Q9BZQ4 307 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 OR2J1Q9GZK6 312 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 HDHD2Q9H0R4 259 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 HINT3Q9NQE9 182 aaKnown RBP14.34□□□□□ -0.11
UBE3D-208ENST00000626828 MRPL22Q9NWU5 206 aaKnown RBP14.34□□□□□ -0.11
UBE3D-208ENST00000626828 CYB5R1Q9UHQ9 305 aa14.34□□□□□ -0.11
UBE3D-208ENST00000626828 FCGR1AP12314 374 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 ZNF3P17036 446 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 GGT2P36268 569 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 LIPAP38571 399 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 RGS6P49758 472 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 CDK5Q00535 292 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 DBPQ10586 325 aaPredicted RBP14.33□□□□□ -0.12
UBE3D-208ENST00000626828 MAD2L1BPQ15013 274 aaPredicted RBP14.33□□□□□ -0.12
UBE3D-208ENST00000626828 CARTPTQ16568 116 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 SPATA46Q5T0L3 261 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 SLC18B1Q6NT16 456 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 ACSM5Q6NUN0 579 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 TMEM154Q6P9G4 183 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 PTP4A1Q93096 173 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 PITX2Q99697 317 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 PIMREGQ9BSJ6 248 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 TPK1Q9H3S4 243 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 STARD10Q9Y365 291 aa14.33□□□□□ -0.12
UBE3D-208ENST00000626828 NIPBLQ6KC79 2804 aaeCLIP14.33□□□□□ -0.12
UBE3D-208ENST00000626828 CR1P17927 2039 aa14.32□□□□□ -0.12
UBE3D-208ENST00000626828 C17orf100A8MU93 164 aa14.32□□□□□ -0.12
UBE3D-208ENST00000626828 G3V2T6 193 aa14.32□□□□□ -0.12
UBE3D-208ENST00000626828 J3QW42 95 aa14.32□□□□□ -0.12
UBE3D-208ENST00000626828 HEXAP06865 529 aa14.32□□□□□ -0.12
UBE3D-208ENST00000626828 NAT2P11245 290 aa14.32□□□□□ -0.12
UBE3D-208ENST00000626828 SPI1P17947 270 aa14.32□□□□□ -0.12
UBE3D-208ENST00000626828 PAICSP22234 425 aaKnown RBP14.32□□□□□ -0.12
UBE3D-208ENST00000626828 LOXL1Q08397 574 aaPredicted RBP14.32□□□□□ -0.12
UBE3D-208ENST00000626828 PCGF3Q3KNV8 242 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms