RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 GUCY1A3Q02108 690 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 SLC34A1Q06495 639 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 LRRC10Q5BKY1 277 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 PABPC1L2AQ5JQF8 200 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 CLEC12AQ5QGZ9 265 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 FAM53AQ6NSI3 398 aaPredicted RBP4.85□□□□□ -1.63
CDKL5-204ENST00000623364 ZNF367Q7RTV3 350 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 SLC36A1Q7Z2H8 476 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 RANBP3LQ86VV4 465 aaPredicted RBP4.85□□□□□ -1.63
CDKL5-204ENST00000623364 FAM90A1Q86YD7 464 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 CLIP4Q8N3C7 705 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 C1orf52Q8N6N3 182 aaKnown RBP4.85□□□□□ -1.63
CDKL5-204ENST00000623364 CDS1Q92903 461 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 EXT2Q93063 718 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 HAVCR1Q96D42 359 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 NAP1L5Q96NT1 182 aaPredicted RBP4.85□□□□□ -1.63
CDKL5-204ENST00000623364 SPATA9Q9BWV2 254 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 IQCGQ9H095 443 aaKnown RBP4.85□□□□□ -1.63
CDKL5-204ENST00000623364 MBNL3Q9NUK0 354 aaKnown RBP4.85□□□□□ -1.63
CDKL5-204ENST00000623364 UFSP2Q9NUQ7 469 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 NMRK1Q9NWW6 199 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 ATP6V1HQ9UI12 483 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 RNF11Q9Y3C5 154 aa4.85□□□□□ -1.63
CDKL5-204ENST00000623364 LOC100509620A0A075B734 347 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 ICMTO60725 284 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 OR2F2O95006 317 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 NCK1P16333 377 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 POU1F1P28069 291 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 ARL1P40616 181 aaPredicted RBP4.84□□□□□ -1.63
CDKL5-204ENST00000623364 NANOS2P60321 138 aaKnown RBP4.84□□□□□ -1.63
CDKL5-204ENST00000623364 ISL1P61371 349 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 HOXA4Q00056 320 aaPredicted RBP4.84□□□□□ -1.63
CDKL5-204ENST00000623364 CDK16Q00536 496 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 SLC7A5Q01650 507 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 HSPB3Q12988 150 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 FOXE3Q13461 319 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 FASTKD3Q14CZ7 662 aaKnown RBP4.84□□□□□ -1.63
CDKL5-204ENST00000623364 PNLIPRP3Q17RR3 467 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 DCST2Q5T1A1 773 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 LETMD1Q6P1Q0 360 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 EMBQ6PCB8 327 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 PRUNE1Q86TP1 453 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 LRRC8AQ8IWT6 810 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 MKXQ8IYA7 352 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 ALDH16A1Q8IZ83 802 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 OR5AS1Q8N127 324 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 CELF2-AS1Q8N7Q2 184 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 OR4K5Q8NGD3 323 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 ANKRD49Q8WVL7 239 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 DLX4Q92988 240 aaPredicted RBP4.84□□□□□ -1.63
CDKL5-204ENST00000623364 GIMAP5Q96F15 307 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 C4orf45Q96LM5 186 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 CCDC140Q96MF4 163 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 STACQ99469 402 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 ECSITQ9BQ95 431 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 RSRP1Q9BUV0 290 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 DERL2Q9GZP9 239 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 MIEF1Q9NQG6 463 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 TMEM38BQ9NVV0 291 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 LINC00527Q9UJ94 153 aa4.84□□□□□ -1.63
CDKL5-204ENST00000623364 MSGN1A6NI15 193 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 LRRC10BA6NIK2 292 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 ZNF726A6NNF4 738 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 G3V2L1 256 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 ARG1P05089 322 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 PNMTP11086 282 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 DDCP20711 480 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 CXCR1P25024 350 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 ENTPD1P49961 510 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 HTR6P50406 440 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 TRAP1Q12931 704 aaKnown RBP4.83□□□□□ -1.64
CDKL5-204ENST00000623364 PDIA2Q13087 525 aaKnown RBP4.83□□□□□ -1.64
CDKL5-204ENST00000623364 ZNF460Q14592 562 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 NR1I3Q14994 352 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 VMACQ2NL98 169 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 SGO1Q5FBB7 561 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 Q6ZRM9 215 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 FOXRED2Q8IWF2 684 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 OR8G5Q8NG78 346 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 OR6S1Q8NH40 331 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 C11orf45Q8TAV5 145 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 TMEM163Q8TC26 289 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 ZNF582Q96NG8 517 aaPredicted RBP4.83□□□□□ -1.64
CDKL5-204ENST00000623364 RBM14Q96PK6 669 aaKnown RBP4.83□□□□□ -1.64
CDKL5-204ENST00000623364 CCL13Q99616 98 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 EMC6Q9BV81 110 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 ELOVL1Q9BW60 279 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 HCAR1Q9BXC0 346 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 GON7Q9BXV9 100 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 PIGUQ9H490 435 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 SRD5A3Q9H8P0 318 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 CCNB1IP1Q9NPC3 277 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 CPSF2Q9P2I0 782 aaKnown RBP4.83□□□□□ -1.64
CDKL5-204ENST00000623364 SLC35A3Q9Y2D2 325 aa4.83□□□□□ -1.64
CDKL5-204ENST00000623364 hCG_1809904A0A1W2PP81 198 aa4.82□□□□□ -1.64
CDKL5-204ENST00000623364 A0A1W2PPE2 198 aa4.82□□□□□ -1.64
CDKL5-204ENST00000623364 A0A1W2PR64 198 aa4.82□□□□□ -1.64
CDKL5-204ENST00000623364 A0A1W2PRV1 198 aa4.82□□□□□ -1.64
CDKL5-204ENST00000623364 A8MVM7 634 aa4.82□□□□□ -1.64
CDKL5-204ENST00000623364 NPHS1O60500 1241 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms