RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 NRARPQ7Z6K4 114 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 LUZP2Q86TE4 346 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 DRAXINQ8NBI3 349 aaPredicted RBP14.49□□□□□ -0.09
LDB3-208ENST00000623007 CPT1CQ8TCG5 803 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 HAS2Q92819 552 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 RELTQ969Z4 430 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 LRFN3Q9BTN0 628 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 SLC25A18Q9H1K4 315 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 PARPBPQ9NWS1 579 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 EMC3Q9P0I2 261 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 IL17BQ9UHF5 180 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 MRPS18BQ9Y676 258 aaKnown RBP14.49□□□□□ -0.09
LDB3-208ENST00000623007 A0A0G2JMM0 328 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 A0A0G2JMP0 313 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 A0A0X1KG70 313 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 A0A1W2PPB8 328 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 A0A1W2PRS3 328 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 KIR3DP1A8MWS1 328 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 MASP2O00187 686 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 SLC17A2O00624 439 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 LYRM1O43325 122 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 RAMP1O60894 148 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 WDPCPO95876 746 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 ACTL6AO96019 429 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 SP1P08047 785 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 TRAPPC2P0DI81 140 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 TRAPPC2BP0DI82 140 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 MFGE8Q08431 387 aaPredicted RBP14.49□□□□□ -0.09
LDB3-208ENST00000623007 ECH1Q13011 328 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 WIPI1Q5MNZ9 446 aaPredicted RBP14.49□□□□□ -0.09
LDB3-208ENST00000623007 ZNF57Q68EA5 555 aaPredicted RBP14.49□□□□□ -0.09
LDB3-208ENST00000623007 SPATC1Q76KD6 591 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 SYT9Q86SS6 491 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 SERPINA12Q8IW75 414 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 CDH26Q8IXH8 852 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 CADM3Q8N126 398 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 MDS2Q8NDY4 140 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 OR4M2Q8NGB6 313 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 OR6M1Q8NGM8 313 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 OR10D3Q8NH80 312 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 HAVCR1Q96D42 359 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 RNF122Q9H9V4 155 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 ACKR4Q9NPB9 350 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 MALT1Q9UDY8 824 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 SLC22A13Q9Y226 551 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 FLVCR1Q9Y5Y0 555 aa14.49□□□□□ -0.09
LDB3-208ENST00000623007 FREM3P0C091 2139 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 KIAA1549Q9HCM3 1950 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 ZNF318Q5VUA4 2279 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 A0A1B0GVI7 797 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 LOC107986453A0A1B0GWG9 222 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 PCNX2A6NKB5 2137 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 RFPL3SP0C7P2 107 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 IGFBP3P17936 291 aaPredicted RBP14.48□□□□□ -0.09
LDB3-208ENST00000623007 EIF1AXP47813 144 aaKnown RBP14.48□□□□□ -0.09
LDB3-208ENST00000623007 PLGLB1Q02325 96 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 FAM189A2Q15884 450 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 RAB11BQ15907 218 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 HES5Q5TA89 166 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 FAM27BQ5VT28 67 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 SULF2Q8IWU5 870 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 RDH10Q8IZV5 341 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 GPR137CQ8N3F9 429 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 PTX4Q96A99 478 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 PHF21AQ96BD5 680 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 NEURL2Q9BR09 285 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 SRXN1Q9BYN0 137 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 TTTY12Q9BZ98 90 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 PBOV1Q9GZY1 135 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 ZNF275Q9NSD4 429 aaPredicted RBP14.48□□□□□ -0.09
LDB3-208ENST00000623007 ASH2LQ9UBL3 628 aa14.48□□□□□ -0.09
LDB3-208ENST00000623007 MCTS1Q9ULC4 181 aaKnown RBP14.48□□□□□ -0.09
LDB3-208ENST00000623007 IGKV3D-15A0A087WSY6 115 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 A0A0A6YYH2 397 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 A0A1B0GTH9 108 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 FAM240BA0A1B0GVZ2 78 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 A6NJ64 397 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 ZNF716A6NP11 495 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 SYT7O43581 403 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 SYNGR4O95473 234 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 MAS1P04201 325 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 GSTT2BP0CG30 244 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 RFX2P48378 723 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 CLDN20P56880 219 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 PCBD1P61457 104 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 PGAP1Q75T13 922 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 FCRLAQ7L513 359 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 AAED1Q7RTV5 226 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 ZIC4Q8N9L1 334 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 OR5D14Q8NGL3 314 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 OR5H6Q8NGV6 325 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 SMIM4Q8WVI0 70 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 C10orf35Q96D05 121 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 ZNF385AQ96PM9 386 aaKnown RBP14.47□□□□□ -0.09
LDB3-208ENST00000623007 SIGLEC12Q96PQ1 595 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 UCN2Q96RP3 112 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 GFI1Q99684 422 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 C11orf54Q9H0W9 315 aaPredicted RBP14.47□□□□□ -0.09
LDB3-208ENST00000623007 DIABLOQ9NR28 239 aa14.47□□□□□ -0.09
LDB3-208ENST00000623007 PCSK5Q92824 1860 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms