RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 TEX12Q9BXU0 123 aa12□□□□□ -0.49
PCDHGC3-208ENST00000622836 MYOZ1Q9NP98 299 aaPredicted RBP12□□□□□ -0.49
PCDHGC3-208ENST00000622836 SLCO1C1Q9NYB5 712 aa12□□□□□ -0.49
PCDHGC3-208ENST00000622836 TAAR3PQ9P1P4 343 aa12□□□□□ -0.49
PCDHGC3-208ENST00000622836 MYEF2Q9P2K5 600 aaKnown RBP12□□□□□ -0.49
PCDHGC3-208ENST00000622836 GRIP1Q9Y3R0 1128 aa12□□□□□ -0.49
PCDHGC3-208ENST00000622836 VPS13CQ709C8 3753 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 IGHV4-30-2A0A087WSY4 118 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 OR6C6A6NF89 314 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 TFP02787 698 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 MT-ND5P03915 603 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 TP53P04637 393 aaPredicted RBP11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 NAT2P11245 290 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 FCGR1AP12314 374 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 OSMP13725 252 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 PAICSP22234 425 aaKnown RBP11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 GRK5P34947 590 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 CCNIQ14094 377 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 ATP6AP1Q15904 470 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 CCDC92Q53HC0 331 aaPredicted RBP11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 ELFN2Q5R3F8 820 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 SLC27A4Q6P1M0 643 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 TMEM154Q6P9G4 183 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 RFPL4BQ6ZWI9 263 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 OR51L1Q8NGJ5 315 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 OR6K6Q8NGW6 343 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 OR5K1Q8NHB7 308 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 SLC25A40Q8TBP6 338 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 NRBF2Q96F24 287 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 PLEKHA8Q96JA3 519 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 PITX2Q99697 317 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 PIMREGQ9BSJ6 248 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 OR2J1Q9GZK6 312 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 CMC2Q9NRP2 79 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 LHFPL6Q9Y693 200 aa11.99□□□□□ -0.49
PCDHGC3-208ENST00000622836 PLSCR5A0PG75 271 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 TVP23AA6NH52 213 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 G3V2T6 193 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 NGFP01138 241 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 GYPBP06028 91 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 DAOP14920 347 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 ZNF250P15622 560 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 SLC25A16P16260 332 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 ZNF23P17027 643 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 FMO3P31513 532 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 GINS1Q14691 196 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 ZNF362Q5T0B9 420 aaPredicted RBP11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 DNM1P46Q6ZS02 220 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 Q71RC1 249 aaPredicted RBP11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 HIPK1Q86Z02 1210 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 DNAJC9Q8WXX5 260 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 SLC7A6Q92536 515 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 UTP4Q969X6 686 aaKnown RBP11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 RBM4Q9BWF3 364 aaKnown RBP11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 HDHD2Q9H0R4 259 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 NTN4Q9HB63 628 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 HINT3Q9NQE9 182 aaKnown RBP11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 PAPOLBQ9NRJ5 636 aaKnown RBP11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 ATPIF1Q9UII2 106 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 KCNG2Q9UJ96 466 aa11.98□□□□□ -0.49
PCDHGC3-208ENST00000622836 IGLV3-9A0A075B6K5 115 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 LOC390937A0A1W2PQ73 354 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 FAM183AA6NL82 134 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 NDUFS8O00217 210 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 TPD52L2O43399 206 aaKnown RBP11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 HMGN1P05114 100 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 DBHP09172 617 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 SPARCP09486 303 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 CLUP10909 449 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 SPI1P17947 270 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 SLC25A1P53007 311 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 SLC18B1Q6NT16 456 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 CFAP77Q6ZQR2 320 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 AMIGO2Q86SJ2 522 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 ZDHHC13Q8IUH4 622 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 KLF14Q8TD94 323 aaPredicted RBP11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 C10orf105Q8TEF2 133 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 IPCEF1Q8WWN9 437 aaPredicted RBP11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 MARS2Q96GW9 593 aaKnown RBP11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 COG8Q96MW5 612 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 DCLRE1CQ96SD1 692 aaKnown RBP11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 DDOQ99489 341 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 COQ7Q99807 217 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 TBCCD1Q9NVR7 557 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 MRPL22Q9NWU5 206 aaKnown RBP11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 CYB5R1Q9UHQ9 305 aa11.97□□□□□ -0.49
PCDHGC3-208ENST00000622836 CSPG4Q6UVK1 2322 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 PRR23D1E9PI22 279 aaPredicted RBP11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 TIMM8AO60220 97 aaPredicted RBP11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 ICMTO60725 284 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 LY6G6DO95868 133 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 IGHV3-13P01766 116 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 PRR23D2P0DMB1 279 aaPredicted RBP11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 GGT2P36268 569 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 MPV17P39210 176 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 RPS27P42677 84 aaKnown RBP11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 RGS6P49758 472 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 BLVRAP53004 296 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 HIST1H3AP68431 136 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 ECH1Q13011 328 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms