RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 OR1G1P47890 313 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 SLC11A1P49279 550 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 DAOAP59103 153 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 UBE2MP61081 183 aaKnown RBP3.15□□□□□ -1.91
CPNE3-213ENST00000622183 SEMG2Q02383 582 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 MECOMQ03112 1051 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 ERCC8Q13216 396 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 MADCAM1Q13477 382 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 HADHQ16836 314 aaKnown RBP3.15□□□□□ -1.91
CPNE3-213ENST00000622183 DNAJC24Q6P3W2 148 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 FBXW12Q6X9E4 464 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 NCCRP1Q6ZVX7 275 aaPredicted RBP3.15□□□□□ -1.91
CPNE3-213ENST00000622183 CBLN2Q8IUK8 224 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF786Q8N393 782 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 NPWQ8N729 165 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 OR52E2Q8NGJ4 325 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF596Q8TC21 504 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 NTAN1Q96AB6 310 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 BCL7BQ9BQE9 202 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 PIGUQ9H490 435 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 RPP21Q9H633 154 aaKnown RBP3.15□□□□□ -1.91
CPNE3-213ENST00000622183 LHX9Q9NQ69 397 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 CHRAC1Q9NRG0 131 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 FAM49BQ9NUQ9 324 aa3.15□□□□□ -1.91
CPNE3-213ENST00000622183 TMEM120BA0PK00 339 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 TRDMT1O14717 391 aaKnown RBP3.14□□□□□ -1.91
CPNE3-213ENST00000622183 ANGPTL7O43827 346 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 ERGP11308 486 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 CSNK2A2P19784 350 aaPredicted RBP3.14□□□□□ -1.91
CPNE3-213ENST00000622183 TUBG1P23258 451 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 CSNK1A1P48729 337 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 MNAT1P51948 309 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 VSX2P58304 361 aaPredicted RBP3.14□□□□□ -1.91
CPNE3-213ENST00000622183 ARG2P78540 354 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 PRR3P79522 188 aaKnown RBP3.14□□□□□ -1.91
CPNE3-213ENST00000622183 CAPRIN1Q14444 709 aaKnown RBP3.14□□□□□ -1.91
CPNE3-213ENST00000622183 PON2Q15165 354 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 TRMT5Q32P41 509 aaKnown RBP3.14□□□□□ -1.91
CPNE3-213ENST00000622183 CHRFAM7AQ494W8 412 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 PLET1Q6UQ28 207 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 FAM122BQ7Z309 247 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 LINC01551Q86U37 167 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 SLC34A3Q8N130 599 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 C15orf56Q8N910 161 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 Q8N9L7 120 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 LRRC75AQ8NAA5 344 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 CHST4Q8NCG5 386 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 OR10AD1Q8NGE0 317 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 ABHD3Q8WU67 409 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF681Q96N22 645 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 FOXC2Q99958 501 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 TPK1Q9H3S4 243 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 SAV1Q9H4B6 383 aaPredicted RBP3.14□□□□□ -1.91
CPNE3-213ENST00000622183 RGCCQ9H4X1 137 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 CYP3A43Q9HB55 503 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 TUBG2Q9NRH3 451 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 OR12D3Q9UGF7 316 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 RHBDD3Q9Y3P4 386 aa3.14□□□□□ -1.91
CPNE3-213ENST00000622183 ZBTB5O15062 677 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 SIVA1O15304 175 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 RP2O75695 350 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 BCHEP06276 602 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 EIF4EP06730 217 aaKnown RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 TLX1NBP0CAT3 122 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 CD82P27701 267 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 DEKP35659 375 aaKnown RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 PEX19P40855 299 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 RFC3P40938 356 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 PPP1CBP62140 327 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 RPS15AP62244 130 aaKnown RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 RGNQ15493 299 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 METTL21CQ5VZV1 264 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 CEMP1Q6PRD7 247 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 ABHD12BQ7Z5M8 362 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 MRPL55Q7Z7F7 128 aaKnown RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 FAM86B1Q8N7N1 296 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF321PQ8N8H1 164 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 INO80EQ8NBZ0 244 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 PROKR2Q8NFJ6 384 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 OR51E1Q8TCB6 317 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF707Q96C28 371 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 OR2A5Q96R48 311 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 SLC17A9Q9BYT1 436 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 IL22Q9GZX6 179 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 TDRD3Q9H7E2 651 aaKnown RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 FANCEQ9HB96 536 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 MRM3Q9HC36 420 aaKnown RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 TRMT112Q9UI30 125 aaKnown RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF223Q9UK11 482 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 TBX21Q9UL17 535 aa3.13□□□□□ -1.91
CPNE3-213ENST00000622183 CHTOPQ9Y3Y2 248 aaKnown RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 ZNF646O15015 1829 aaPredicted RBP3.13□□□□□ -1.91
CPNE3-213ENST00000622183 IGLV4-69A0A075B6H9 119 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 A0A1B0GVX0 72 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 RDH16O75452 317 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 HPRT1P00492 218 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 PRKACAP17612 351 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 MSR1P21757 451 aa3.12□□□□□ -1.91
CPNE3-213ENST00000622183 UBE2NP61088 152 aaKnown RBP3.12□□□□□ -1.91
CPNE3-213ENST00000622183 CDH17Q12864 832 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms